RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 V9GYH0 126 aa-0.17□□□□□ -2.44
LTN1-206ENST00000486427 TNXBP22105 4242 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 PIGBOS1A0A0B4J2F0 54 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 MIF4GDA9UHW6 222 aaKnown RBP-0.18□□□□□ -2.44
LTN1-206ENST00000486427 SPRR1AP35321 89 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 S100A12P80511 92 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 MYO7BQ6PIF6 2116 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.18□□□□□ -2.44
LTN1-206ENST00000486427 SMIM4Q8WVI0 70 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 NDUFA4L2Q9NRX3 87 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 BCL9LQ86UU0 1499 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 BTAF1O14981 1849 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 RIMS1Q86UR5 1692 aaKnown RBP-0.18□□□□□ -2.44
LTN1-206ENST00000486427 QRICH2Q9H0J4 1663 aa-0.18□□□□□ -2.44
LTN1-206ENST00000486427 CPSF1Q10570 1443 aaKnown RBP-0.19□□□□□ -2.44
LTN1-206ENST00000486427 C10orf71Q711Q0 1435 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 I3L2K1 104 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 K7EP13 123 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 PRM1P04553 51 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 SPRR2DP22532 72 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 BTG2P78543 158 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 Q56UQ5 140 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 TMEM170BQ5T4T1 132 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 Q5VSD8 79 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 PPP3R2Q96LZ3 170 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 TSC22D3Q99576 134 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 TP53AIP1Q9HCN2 124 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 TCHHQ07283 1943 aa-0.19□□□□□ -2.44
LTN1-206ENST00000486427 SPTBN1Q01082 2364 aaKnown RBP-0.19□□□□□ -2.44
LTN1-206ENST00000486427 TSC2P49815 1807 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 HECTD4Q9Y4D8 3996 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 PAPPAQ13219 1627 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 PIEZO2Q9H5I5 2752 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 TRBV7-3A0A075B6L6 115 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 F8VRH5 84 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 HMGN4O00479 90 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 HMGN1P05114 100 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 CATR1Q13166 79 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 Q6JHZ5 121 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 BAGE2Q86Y30 109 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 MGST2Q99735 147 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 SPANXDQ9BXN6 97 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 LINC00474Q9P2X8 69 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 DCHS2Q6V1P9 2916 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 MUC2Q02817 5179 aa-0.2□□□□□ -2.44
LTN1-206ENST00000486427 GVINP1Q7Z2Y8 2422 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 MYOM1P52179 1685 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 CUL7Q14999 1698 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 FLNAP21333 2647 aaKnown RBP-0.21□□□□□ -2.44
LTN1-206ENST00000486427 FXYD6-FXYD2A0A087WZ82 144 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 IGLC7A0M8Q6 106 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 OOSP1A8MZH6 123 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 UQCR11O14957 56 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 APOC2P02655 101 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 S100A3P33764 101 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 COX17Q14061 63 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 DYNLRB1Q9NP97 96 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 LINC01558Q9Y6Z2 57 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 ARHGEF5Q12774 1597 aa-0.21□□□□□ -2.44
LTN1-206ENST00000486427 CSPG4Q6UVK1 2322 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 TRBV6-1A0A0K0K1D8 114 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 FGF7P21781 194 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 COMMD6Q7Z4G1 85 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 C5orf38Q86SI9 138 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 KDM5AP29375 1690 aaKnown RBP-0.22□□□□□ -2.44
LTN1-206ENST00000486427 ZANQ9Y493 2812 aa-0.22□□□□□ -2.44
LTN1-206ENST00000486427 ROCK2O75116 1388 aaKnown RBP-0.22□□□□□ -2.45
LTN1-206ENST00000486427 STAB1Q9NY15 2570 aa-0.22□□□□□ -2.45
LTN1-206ENST00000486427 NAIPQ13075 1403 aa-0.22□□□□□ -2.45
LTN1-206ENST00000486427 FAT2Q9NYQ8 4349 aa-0.22□□□□□ -2.45
LTN1-206ENST00000486427 TET3O43151 1660 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 NALCNQ8IZF0 1738 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 APOC3P02656 99 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 AKAIN1P0CW23 69 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 TPPP2P59282 170 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 DCDP81605 110 aaKnown RBP-0.23□□□□□ -2.45
LTN1-206ENST00000486427 C8orf59Q8N0T1 100 aaPredicted RBP-0.23□□□□□ -2.45
LTN1-206ENST00000486427 PP6455Q8WZ26 134 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 NSD3Q9BZ95 1437 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 ATRQ13535 2644 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 A2ML1A8K2U0 1454 aa-0.23□□□□□ -2.45
LTN1-206ENST00000486427 RAPGEF6Q8TEU7 1601 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 LRP1BQ9NZR2 4599 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 CHKB-CPT1BH3BT56 60 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 SSSCA1O60232 199 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 SFT2D2O95562 160 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 TNFP01375 233 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 IFNGP01579 166 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 PIGYQ3MUY2 71 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 MRPL54Q6P161 138 aaKnown RBP-0.24□□□□□ -2.45
LTN1-206ENST00000486427 C1orf54Q8WWF1 131 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 MAP1BP46821 2468 aaKnown RBP-0.24□□□□□ -2.45
LTN1-206ENST00000486427 TENM2Q9NT68 2774 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 COL6A3P12111 3177 aa-0.24□□□□□ -2.45
LTN1-206ENST00000486427 K7EQZ3 153 aa-0.25□□□□□ -2.45
LTN1-206ENST00000486427 C9orf153Q5TBE3 101 aa-0.25□□□□□ -2.45
LTN1-206ENST00000486427 DPH3P1Q9H4G8 78 aa-0.25□□□□□ -2.45
LTN1-206ENST00000486427 CDC42SE2Q9NRR3 84 aa-0.25□□□□□ -2.45
LTN1-206ENST00000486427 ARHGEF12Q9NZN5 1544 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms