RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 NDUFA5Q16718 116 aa11.7□□□□□ -0.54
SREBF1-213ENST00000485080 SVBPQ8N300 66 aa11.7□□□□□ -0.54
SREBF1-213ENST00000485080 TMEM101Q96IK0 257 aa11.7□□□□□ -0.54
SREBF1-213ENST00000485080 COX19Q49B96 90 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 C14orf177Q52M58 125 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 OR5A1Q8NGJ0 315 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 GNB1LQ9BYB4 327 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 RPS10P5Q9NQ39 176 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
SREBF1-213ENST00000485080 IGLV5-52A0A0A0MRZ9 124 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 LECT2O14960 151 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 SNAPINO95295 136 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 HLA-DQA1P01909 254 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 APOC3P02656 99 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
SREBF1-213ENST00000485080 GCSHP23434 173 aa11.67□□□□□ -0.54
SREBF1-213ENST00000485080 MAP1LC3AQ9H492 121 aa11.67□□□□□ -0.54
SREBF1-213ENST00000485080 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
SREBF1-213ENST00000485080 IGLV10-54A0A075B6I4 117 aa11.66□□□□□ -0.54
SREBF1-213ENST00000485080 FUSP35637 526 aaKnown RBP eCLIP11.66□□□□□ -0.54
SREBF1-213ENST00000485080 ZNF664Q8N3J9 261 aa11.66□□□□□ -0.54
SREBF1-213ENST00000485080 USP17L23D6RBM5 183 aa11.65□□□□□ -0.54
SREBF1-213ENST00000485080 K7EMI3 77 aa11.65□□□□□ -0.54
SREBF1-213ENST00000485080 Q8N8P6 123 aa11.65□□□□□ -0.54
SREBF1-213ENST00000485080 MT-ND6P03923 174 aa11.64□□□□□ -0.55
SREBF1-213ENST00000485080 RAB5AP20339 215 aa11.64□□□□□ -0.55
SREBF1-213ENST00000485080 KRTAP10-1P60331 282 aa11.64□□□□□ -0.55
SREBF1-213ENST00000485080 DGAT2L7PQ6IED9 249 aa11.64□□□□□ -0.55
SREBF1-213ENST00000485080 CCL25O15444 150 aa11.63□□□□□ -0.55
SREBF1-213ENST00000485080 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
SREBF1-213ENST00000485080 SPANXA1Q9NS26 97 aa11.63□□□□□ -0.55
SREBF1-213ENST00000485080 LINC00959A0A1B0GUT2 108 aa11.62□□□□□ -0.55
SREBF1-213ENST00000485080 NXT2Q9NPJ8 142 aaKnown RBP11.62□□□□□ -0.55
SREBF1-213ENST00000485080 LOC389332A0A1B0GUA5 103 aa11.61□□□□□ -0.55
SREBF1-213ENST00000485080 RPL39P62891 51 aaKnown RBP11.61□□□□□ -0.55
SREBF1-213ENST00000485080 MRPS36P82909 103 aaKnown RBP11.61□□□□□ -0.55
SREBF1-213ENST00000485080 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
SREBF1-213ENST00000485080 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.6□□□□□ -0.55
SREBF1-213ENST00000485080 IGKV3OR2-268A0A0C4DH90 116 aa11.6□□□□□ -0.55
SREBF1-213ENST00000485080 GAGE12HA6NDE8 117 aa11.6□□□□□ -0.55
SREBF1-213ENST00000485080 PRSS1P07477 247 aa11.6□□□□□ -0.55
SREBF1-213ENST00000485080 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
SREBF1-213ENST00000485080 FAT1Q14517 4588 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 FOXI1Q12951 378 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 SS18Q15532 418 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 KIAA1644Q3SXP7 199 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 ORMDL2Q53FV1 153 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 CFAP161Q6P656 301 aa11.59□□□□□ -0.55
SREBF1-213ENST00000485080 ALKBH7Q9BT30 221 aaPredicted RBP11.59□□□□□ -0.55
SREBF1-213ENST00000485080 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
SREBF1-213ENST00000485080 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
SREBF1-213ENST00000485080 Q6ZUT4 128 aa11.58□□□□□ -0.56
SREBF1-213ENST00000485080 MRPL18Q9H0U6 180 aaKnown RBP11.58□□□□□ -0.56
SREBF1-213ENST00000485080 TGIF2-C20orf24A0A0A6YYL0 155 aa11.57□□□□□ -0.56
SREBF1-213ENST00000485080 CNBPP62633 177 aaKnown RBP11.57□□□□□ -0.56
SREBF1-213ENST00000485080 SLC7A5P1Q8MH63 180 aa11.57□□□□□ -0.56
SREBF1-213ENST00000485080 YPEL4Q96NS1 127 aa11.57□□□□□ -0.56
SREBF1-213ENST00000485080 LINC01546A6NGU7 62 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 NPSP0C0P6 89 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 G0S2P27469 103 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
SREBF1-213ENST00000485080 XGP55808 180 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 Q6ZSA8 131 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 C15orf56Q8N910 161 aa11.56□□□□□ -0.56
SREBF1-213ENST00000485080 XCL1P47992 114 aa11.55□□□□□ -0.56
SREBF1-213ENST00000485080 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
SREBF1-213ENST00000485080 C2orf66Q6UXQ4 117 aa11.54□□□□□ -0.56
SREBF1-213ENST00000485080 C9orf163Q8N9P6 203 aa11.54□□□□□ -0.56
SREBF1-213ENST00000485080 GVQW2A0A096LPI5 108 aaPredicted RBP11.53□□□□□ -0.56
SREBF1-213ENST00000485080 hDV102S1A0JD36 115 aa11.53□□□□□ -0.56
SREBF1-213ENST00000485080 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
SREBF1-213ENST00000485080 TRAPPC1Q9Y5R8 145 aa11.53□□□□□ -0.56
SREBF1-213ENST00000485080 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 TRAV13-1A0A0B4J241 112 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 IGIPA6NJ69 53 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 PRSS3P2Q8NHM4 247 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
SREBF1-213ENST00000485080 SMCO4Q9NRQ5 59 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 AP5S1Q9NUS5 200 aa11.52□□□□□ -0.57
SREBF1-213ENST00000485080 IGHV1-58A0A0C4DH39 117 aa11.51□□□□□ -0.57
SREBF1-213ENST00000485080 LINC01549A6NIU2 74 aa11.51□□□□□ -0.57
SREBF1-213ENST00000485080 SLPIP03973 132 aa11.51□□□□□ -0.57
SREBF1-213ENST00000485080 TMEM141Q96I45 108 aa11.51□□□□□ -0.57
SREBF1-213ENST00000485080 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
SREBF1-213ENST00000485080 TOMM6Q96B49 74 aa11.5□□□□□ -0.57
SREBF1-213ENST00000485080 VPS13BQ7Z7G8 4022 aa11.5□□□□□ -0.57
SREBF1-213ENST00000485080 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.49□□□□□ -0.57
SREBF1-213ENST00000485080 COX7A2LO14548 114 aa11.49□□□□□ -0.57
SREBF1-213ENST00000485080 LINC01620Q4KN68 170 aa11.49□□□□□ -0.57
SREBF1-213ENST00000485080 Q8N1X5 172 aa11.49□□□□□ -0.57
SREBF1-213ENST00000485080 AMELXQ99217 191 aa11.49□□□□□ -0.57
SREBF1-213ENST00000485080 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
SREBF1-213ENST00000485080 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
SREBF1-213ENST00000485080 IFITM10A6NMD0 228 aa11.48□□□□□ -0.57
SREBF1-213ENST00000485080 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
SREBF1-213ENST00000485080 Q6ZN92 141 aa11.47□□□□□ -0.57
SREBF1-213ENST00000485080 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
SREBF1-213ENST00000485080 SDIM1Q6ZPB5 146 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms