RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 MIFP14174 115 aa11.75□□□□□ -0.53
PCCB-217ENST00000484181 DEFB135Q30KP9 77 aa11.75□□□□□ -0.53
PCCB-217ENST00000484181 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
PCCB-217ENST00000484181 TMEM238LA0A1B0GVL6 79 aa11.75□□□□□ -0.53
PCCB-217ENST00000484181 A6NJY4 79 aa11.75□□□□□ -0.53
PCCB-217ENST00000484181 SMIM13P0DJ93 91 aa11.74□□□□□ -0.53
PCCB-217ENST00000484181 VAMP3Q15836 100 aa11.73□□□□□ -0.53
PCCB-217ENST00000484181 SBSPONQ8IVN8 264 aa11.73□□□□□ -0.53
PCCB-217ENST00000484181 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
PCCB-217ENST00000484181 IGHV4-30-4P0DP06 118 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 TIRAPP58753 221 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 HERVK_113P63121 156 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 NTM-AS1Q6ZSK4 140 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
PCCB-217ENST00000484181 TEX48A0A1B0GUV7 120 aa11.71□□□□□ -0.53
PCCB-217ENST00000484181 LINC00694P0DN24 101 aa11.71□□□□□ -0.53
PCCB-217ENST00000484181 SRSF9Q13242 221 aaKnown RBP eCLIP11.71□□□□□ -0.53
PCCB-217ENST00000484181 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
PCCB-217ENST00000484181 FXYD2P54710 66 aa11.71□□□□□ -0.54
PCCB-217ENST00000484181 SPANXB1Q9NS25 103 aaPredicted RBP11.71□□□□□ -0.54
PCCB-217ENST00000484181 IGHV4-28A0A0C4DH34 117 aa11.7□□□□□ -0.54
PCCB-217ENST00000484181 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
PCCB-217ENST00000484181 C9orf118A6NHY6 69 aa11.7□□□□□ -0.54
PCCB-217ENST00000484181 RNF183Q96D59 192 aa11.7□□□□□ -0.54
PCCB-217ENST00000484181 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
PCCB-217ENST00000484181 LOC100131303A0A0U1RQF7 123 aa11.69□□□□□ -0.54
PCCB-217ENST00000484181 DAD1P61803 113 aa11.69□□□□□ -0.54
PCCB-217ENST00000484181 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
PCCB-217ENST00000484181 IGLV5-45A0A087WSX0 123 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 A0A0J9YY99 117 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 UBE2V1Q13404 147 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
PCCB-217ENST00000484181 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 IGHV3-30-3P0DP02 117 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 GYPEP15421 78 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 Q6ZVH6 145 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 ATP6V0E2Q8NHE4 81 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 CDC42SE2Q9NRR3 84 aa11.68□□□□□ -0.54
PCCB-217ENST00000484181 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
PCCB-217ENST00000484181 IGHV3-64A0A075B6Q5 118 aa11.67□□□□□ -0.54
PCCB-217ENST00000484181 VSIG2Q96IQ7 327 aa11.67□□□□□ -0.54
PCCB-217ENST00000484181 F8P00451 2351 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 A8MZ25 164 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 PAX4O43316 350 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 ATP5G1P05496 136 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 Q8NAQ8 132 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PCCB-217ENST00000484181 EGFEM1PQ0D2K5 195 aa11.65□□□□□ -0.54
PCCB-217ENST00000484181 GTF2H5Q6ZYL4 71 aa11.65□□□□□ -0.54
PCCB-217ENST00000484181 RAB37Q96AX2 223 aa11.65□□□□□ -0.54
PCCB-217ENST00000484181 H3BUT2 72 aa11.64□□□□□ -0.55
PCCB-217ENST00000484181 OXLD1Q5BKU9 147 aa11.64□□□□□ -0.55
PCCB-217ENST00000484181 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
PCCB-217ENST00000484181 TRAV13-1A0A0B4J241 112 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 SPINK8P0C7L1 97 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 FABP2P12104 132 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 GAGE6Q13070 117 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 CDKN2A-AS1Q9UH64 79 aa11.63□□□□□ -0.55
PCCB-217ENST00000484181 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 ZFAND6Q6FIF0 208 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 SH2D6Q7Z4S9 175 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 NDUFA12Q9UI09 145 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 NIPBLQ6KC79 2804 aaeCLIP11.62□□□□□ -0.55
PCCB-217ENST00000484181 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
PCCB-217ENST00000484181 TEP1Q99973 2627 aaKnown RBP11.61□□□□□ -0.55
PCCB-217ENST00000484181 TRAV8-3A0A0A6YYJ7 113 aa11.61□□□□□ -0.55
PCCB-217ENST00000484181 A0A1W2PPM0 123 aa11.61□□□□□ -0.55
PCCB-217ENST00000484181 GAGE10A6NGK3 116 aa11.61□□□□□ -0.55
PCCB-217ENST00000484181 K7EP13 123 aa11.61□□□□□ -0.55
PCCB-217ENST00000484181 DEFB4AO15263 64 aa11.61□□□□□ -0.55
PCCB-217ENST00000484181 A0A0J9YXY3 114 aa11.6□□□□□ -0.55
PCCB-217ENST00000484181 K7ERJ3 54 aa11.6□□□□□ -0.55
PCCB-217ENST00000484181 IGHV3-30P01768 117 aa11.6□□□□□ -0.55
PCCB-217ENST00000484181 IGHV3-30-5P0DP03 117 aa11.6□□□□□ -0.55
PCCB-217ENST00000484181 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
PCCB-217ENST00000484181 NDUFA1O15239 70 aa11.59□□□□□ -0.55
PCCB-217ENST00000484181 KRTAP10-11P60412 298 aa11.59□□□□□ -0.55
PCCB-217ENST00000484181 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
PCCB-217ENST00000484181 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 A0A1B0GUV1 79 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 K7EP34 96 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 CCL25O15444 150 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 TIMM17BO60830 172 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.56
PCCB-217ENST00000484181 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
PCCB-217ENST00000484181 ATRQ13535 2644 aa11.57□□□□□ -0.56
PCCB-217ENST00000484181 F5H768 121 aa11.57□□□□□ -0.56
PCCB-217ENST00000484181 MRPL23Q16540 153 aaKnown RBP11.57□□□□□ -0.56
PCCB-217ENST00000484181 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
PCCB-217ENST00000484181 SPCS1Q9Y6A9 102 aa11.57□□□□□ -0.56
PCCB-217ENST00000484181 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
PCCB-217ENST00000484181 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
PCCB-217ENST00000484181 COX6A2Q02221 97 aa11.56□□□□□ -0.56
PCCB-217ENST00000484181 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms