RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 C3orf22Q8N5N4 141 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 CHCHD5Q9BSY4 110 aa10.33□□□□□ -0.76
NR1H3-220ENST00000481020 HRNRQ86YZ3 2850 aaPredicted RBP10.33□□□□□ -0.76
NR1H3-220ENST00000481020 BAALC-AS2P0C853 105 aa10.32□□□□□ -0.76
NR1H3-220ENST00000481020 USP24Q9UPU5 2620 aa10.32□□□□□ -0.76
NR1H3-220ENST00000481020 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 ATP5J2P56134 94 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 TMEM95Q3KNT9 176 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 PRIMA1Q86XR5 153 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
NR1H3-220ENST00000481020 IGHV4-30-2A0A087WSY4 118 aa10.3□□□□□ -0.76
NR1H3-220ENST00000481020 IGHV4-59P01825 116 aa10.3□□□□□ -0.76
NR1H3-220ENST00000481020 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 RBMY1BA6NDE4 496 aaKnown RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 RBMY1EA6NEQ0 496 aaKnown RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
NR1H3-220ENST00000481020 RBMY1DP0C7P1 496 aaKnown RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 DEFB112Q30KQ8 113 aa10.3□□□□□ -0.76
NR1H3-220ENST00000481020 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
NR1H3-220ENST00000481020 VPREB3Q9UKI3 123 aa10.3□□□□□ -0.76
NR1H3-220ENST00000481020 HTN1P15515 57 aa10.29□□□□□ -0.76
NR1H3-220ENST00000481020 COX6A2Q02221 97 aa10.29□□□□□ -0.76
NR1H3-220ENST00000481020 HIVEP3Q5T1R4 2406 aa10.29□□□□□ -0.76
NR1H3-220ENST00000481020 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
NR1H3-220ENST00000481020 LRBAP50851 2863 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 F5H768 121 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 H0YGX0 51 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 LINC01356Q8N9X3 169 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 IL17DQ8TAD2 202 aa10.28□□□□□ -0.76
NR1H3-220ENST00000481020 BBC3Q96PG8 261 aaPredicted RBP10.28□□□□□ -0.76
NR1H3-220ENST00000481020 NDUFA7O95182 113 aa10.27□□□□□ -0.76
NR1H3-220ENST00000481020 RELNP78509 3460 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 ATOX1O00244 68 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 AVPP01185 164 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 CRPP02741 224 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 MALP21145 153 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 HIST1H4AP62805 103 aaKnown RBP10.27□□□□□ -0.77
NR1H3-220ENST00000481020 C9orf153Q5TBE3 101 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 CDC42SE2Q9NRR3 84 aa10.27□□□□□ -0.77
NR1H3-220ENST00000481020 IGHV3-38A0A0C4DH36 116 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 A0A1B0GX51 115 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 PRB1P04280 392 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 C10orf99Q6UWK7 81 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 Q8N2B8 174 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 ZNF702PQ9H963 129 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 Q9UF83 564 aa10.26□□□□□ -0.77
NR1H3-220ENST00000481020 TRAV25A0A0B4J276 109 aa10.25□□□□□ -0.77
NR1H3-220ENST00000481020 K7EQD1 137 aa10.25□□□□□ -0.77
NR1H3-220ENST00000481020 COX7CP15954 63 aa10.25□□□□□ -0.77
NR1H3-220ENST00000481020 ABCA2Q9BZC7 2435 aa10.25□□□□□ -0.77
NR1H3-220ENST00000481020 OBSCN-AS1Q96MR7 158 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 CFAP46Q8IYW2 2715 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 CRYGAP11844 174 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 Q6YL49 198 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 ZNF843Q8N446 348 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
NR1H3-220ENST00000481020 DNAL4O96015 105 aa10.23□□□□□ -0.77
NR1H3-220ENST00000481020 LRRC75A-AS1Q8N1F1 130 aa10.23□□□□□ -0.77
NR1H3-220ENST00000481020 RPS28P62857 69 aaKnown RBP10.22□□□□□ -0.77
NR1H3-220ENST00000481020 DYNLRB2Q8TF09 96 aa10.22□□□□□ -0.77
NR1H3-220ENST00000481020 MED13LQ71F56 2210 aa10.22□□□□□ -0.77
NR1H3-220ENST00000481020 TRAV13-1A0A0B4J241 112 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 FSHBP01225 129 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 Q6JHZ5 121 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 EPG5Q9HCE0 2579 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 DOPEY2Q9Y3R5 2298 aa10.21□□□□□ -0.77
NR1H3-220ENST00000481020 LINC00694P0DN24 101 aa10.21□□□□□ -0.78
NR1H3-220ENST00000481020 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.78
NR1H3-220ENST00000481020 SPTBN1Q01082 2364 aaKnown RBP10.21□□□□□ -0.78
NR1H3-220ENST00000481020 NACAE9PAV3 2078 aa10.21□□□□□ -0.78
NR1H3-220ENST00000481020 IBA57-AS1B1ANH7 110 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 UBE2L6O14933 153 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 SLURP1P55000 103 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 DEFB114Q30KQ6 69 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 GAGE2AQ6NT46 116 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 COX7B2Q8TF08 81 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 NRGNQ92686 78 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
NR1H3-220ENST00000481020 ZFYVE26Q68DK2 2539 aa10.19□□□□□ -0.78
NR1H3-220ENST00000481020 CMC4P56277 68 aaPredicted RBP10.19□□□□□ -0.78
NR1H3-220ENST00000481020 TRGV1A0A0A0MS02 117 aa10.18□□□□□ -0.78
NR1H3-220ENST00000481020 J3KT08 172 aa10.18□□□□□ -0.78
NR1H3-220ENST00000481020 RPL18AQ02543 176 aaKnown RBP10.18□□□□□ -0.78
NR1H3-220ENST00000481020 KLK5Q9Y337 293 aaPredicted RBP10.18□□□□□ -0.78
NR1H3-220ENST00000481020 A0A0U1RRA0 63 aa10.17□□□□□ -0.78
NR1H3-220ENST00000481020 S100A7L2Q5SY68 101 aa10.17□□□□□ -0.78
NR1H3-220ENST00000481020 C2orf48Q96LS8 159 aa10.17□□□□□ -0.78
NR1H3-220ENST00000481020 CSMD1Q96PZ7 3565 aa10.17□□□□□ -0.78
NR1H3-220ENST00000481020 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
NR1H3-220ENST00000481020 STHQ8IWL8 128 aa10.16□□□□□ -0.78
NR1H3-220ENST00000481020 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms