RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 RPL32P62910 135 aaKnown RBP13.46□□□□□ -0.25
PKP4-209ENST00000479398 CDC42SE2Q9NRR3 84 aa13.46□□□□□ -0.25
PKP4-209ENST00000479398 CHCHD10Q8WYQ3 142 aaPredicted RBP13.45□□□□□ -0.26
PKP4-209ENST00000479398 PCLOQ9Y6V0 5065 aa13.44□□□□□ -0.26
PKP4-209ENST00000479398 PHOX2AO14813 284 aa13.44□□□□□ -0.26
PKP4-209ENST00000479398 ADCYAP1P18509 176 aa13.44□□□□□ -0.26
PKP4-209ENST00000479398 ZNF664Q8N3J9 261 aa13.44□□□□□ -0.26
PKP4-209ENST00000479398 NPYP01303 97 aa13.43□□□□□ -0.26
PKP4-209ENST00000479398 TMEM136Q6ZRR5 245 aa13.43□□□□□ -0.26
PKP4-209ENST00000479398 C9orf163Q8N9P6 203 aa13.43□□□□□ -0.26
PKP4-209ENST00000479398 CSDC2Q9Y534 153 aaKnown RBP13.43□□□□□ -0.26
PKP4-209ENST00000479398 DNAH8Q96JB1 4490 aa13.43□□□□□ -0.26
PKP4-209ENST00000479398 LINC00959A0A1B0GUT2 108 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 hDV102S1A0JD36 115 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 TCAPO15273 167 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 CFAP161Q6P656 301 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 ORMDL3Q8N138 153 aa13.42□□□□□ -0.26
PKP4-209ENST00000479398 TMEM18Q96B42 140 aa13.41□□□□□ -0.26
PKP4-209ENST00000479398 IMMP2LQ96T52 175 aa13.41□□□□□ -0.26
PKP4-209ENST00000479398 SMIM2Q9BVW6 85 aa13.41□□□□□ -0.26
PKP4-209ENST00000479398 SEC11CQ9BY50 192 aa13.41□□□□□ -0.26
PKP4-209ENST00000479398 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
PKP4-209ENST00000479398 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
PKP4-209ENST00000479398 Q5VSD8 79 aa13.4□□□□□ -0.26
PKP4-209ENST00000479398 COMMD7Q86VX2 200 aa13.4□□□□□ -0.26
PKP4-209ENST00000479398 PRELID3AQ96N28 172 aa13.4□□□□□ -0.26
PKP4-209ENST00000479398 CNBPP62633 177 aaKnown RBP13.39□□□□□ -0.27
PKP4-209ENST00000479398 FOXI1Q12951 378 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 SS18Q15532 418 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 TIMM21Q9BVV7 248 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 AP5S1Q9NUS5 200 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 FAT1Q14517 4588 aa13.39□□□□□ -0.27
PKP4-209ENST00000479398 CCL25O15444 150 aa13.38□□□□□ -0.27
PKP4-209ENST00000479398 SLPIP03973 132 aa13.38□□□□□ -0.27
PKP4-209ENST00000479398 XCL1P47992 114 aa13.38□□□□□ -0.27
PKP4-209ENST00000479398 C15orf56Q8N910 161 aa13.38□□□□□ -0.27
PKP4-209ENST00000479398 CHAC1Q9BUX1 264 aa13.38□□□□□ -0.27
PKP4-209ENST00000479398 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
PKP4-209ENST00000479398 ABCA13Q86UQ4 5058 aa13.36□□□□□ -0.27
PKP4-209ENST00000479398 SDIM1Q6ZPB5 146 aa13.36□□□□□ -0.27
PKP4-209ENST00000479398 SCXQ7RTU7 201 aa13.36□□□□□ -0.27
PKP4-209ENST00000479398 LAMTOR2Q9Y2Q5 125 aa13.36□□□□□ -0.27
PKP4-209ENST00000479398 RPL39P62891 51 aaKnown RBP13.35□□□□□ -0.27
PKP4-209ENST00000479398 CIRBP-AS1Q8TBR5 109 aa13.35□□□□□ -0.27
PKP4-209ENST00000479398 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.34□□□□□ -0.27
PKP4-209ENST00000479398 RAB5AP20339 215 aa13.34□□□□□ -0.27
PKP4-209ENST00000479398 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
PKP4-209ENST00000479398 CD164L2Q6UWJ8 174 aa13.34□□□□□ -0.27
PKP4-209ENST00000479398 LOC389332A0A1B0GUA5 103 aa13.33□□□□□ -0.28
PKP4-209ENST00000479398 C1orf196B1AJZ1 125 aa13.33□□□□□ -0.28
PKP4-209ENST00000479398 HIGD2BQ4VC39 106 aa13.33□□□□□ -0.28
PKP4-209ENST00000479398 RNASE13Q5GAN3 156 aaKnown RBP13.33□□□□□ -0.28
PKP4-209ENST00000479398 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
PKP4-209ENST00000479398 Q6ZUT4 128 aa13.32□□□□□ -0.28
PKP4-209ENST00000479398 MAP1LC3AQ9H492 121 aa13.32□□□□□ -0.28
PKP4-209ENST00000479398 GVQW2A0A096LPI5 108 aaPredicted RBP13.31□□□□□ -0.28
PKP4-209ENST00000479398 INAFM2P0DMQ5 153 aa13.31□□□□□ -0.28
PKP4-209ENST00000479398 FAM104AQ969W3 186 aa13.31□□□□□ -0.28
PKP4-209ENST00000479398 SPANXA1Q9NS26 97 aa13.31□□□□□ -0.28
PKP4-209ENST00000479398 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
PKP4-209ENST00000479398 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
PKP4-209ENST00000479398 IGHV1-58A0A0C4DH39 117 aa13.3□□□□□ -0.28
PKP4-209ENST00000479398 LINC00528Q8N1L1 170 aa13.3□□□□□ -0.28
PKP4-209ENST00000479398 S100PP25815 95 aa13.29□□□□□ -0.28
PKP4-209ENST00000479398 MRPS36P82909 103 aaKnown RBP13.29□□□□□ -0.28
PKP4-209ENST00000479398 Q8N8P6 123 aa13.29□□□□□ -0.28
PKP4-209ENST00000479398 OPRPNQ99935 248 aaPredicted RBP13.29□□□□□ -0.28
PKP4-209ENST00000479398 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
PKP4-209ENST00000479398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.29□□□□□ -0.28
PKP4-209ENST00000479398 PLA2G1BP04054 148 aaKnown RBP13.27□□□□□ -0.29
PKP4-209ENST00000479398 PANO1I0J062 215 aa13.26□□□□□ -0.29
PKP4-209ENST00000479398 PYGO1Q9Y3Y4 419 aa13.26□□□□□ -0.29
PKP4-209ENST00000479398 COX7A2LO14548 114 aa13.25□□□□□ -0.29
PKP4-209ENST00000479398 IFI27P40305 119 aaPredicted RBP13.25□□□□□ -0.29
PKP4-209ENST00000479398 RHEBQ15382 184 aa13.25□□□□□ -0.29
PKP4-209ENST00000479398 KIAA1644Q3SXP7 199 aa13.25□□□□□ -0.29
PKP4-209ENST00000479398 RPS10P5Q9NQ39 176 aa13.25□□□□□ -0.29
PKP4-209ENST00000479398 SRRM2Q9UQ35 2752 aaKnown RBP13.25□□□□□ -0.29
PKP4-209ENST00000479398 K7EMI3 77 aa13.24□□□□□ -0.29
PKP4-209ENST00000479398 MALP21145 153 aa13.24□□□□□ -0.29
PKP4-209ENST00000479398 CIRBPQ14011 172 aaKnown RBP13.24□□□□□ -0.29
PKP4-209ENST00000479398 LINC00526Q96FQ7 95 aa13.24□□□□□ -0.29
PKP4-209ENST00000479398 DPH3Q96FX2 82 aa13.24□□□□□ -0.29
PKP4-209ENST00000479398 GNB1LQ9BYB4 327 aa13.24□□□□□ -0.29
PKP4-209ENST00000479398 ZNF561-AS1K7EIQ3 104 aa13.23□□□□□ -0.29
PKP4-209ENST00000479398 COX6A2Q02221 97 aa13.23□□□□□ -0.29
PKP4-209ENST00000479398 C5orf38Q86SI9 138 aa13.23□□□□□ -0.29
PKP4-209ENST00000479398 NXT2Q9NPJ8 142 aaKnown RBP13.23□□□□□ -0.29
PKP4-209ENST00000479398 ORMDL2Q53FV1 153 aa13.22□□□□□ -0.29
PKP4-209ENST00000479398 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
PKP4-209ENST00000479398 COX19Q49B96 90 aa13.21□□□□□ -0.29
PKP4-209ENST00000479398 PRSS3P2Q8NHM4 247 aa13.21□□□□□ -0.29
PKP4-209ENST00000479398 CYSLTR1Q9Y271 337 aa13.21□□□□□ -0.29
PKP4-209ENST00000479398 VPS13BQ7Z7G8 4022 aa13.21□□□□□ -0.3
PKP4-209ENST00000479398 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
PKP4-209ENST00000479398 CHTF8P0CG12 524 aa13.2□□□□□ -0.3
PKP4-209ENST00000479398 C2orf66Q6UXQ4 117 aa13.2□□□□□ -0.3
PKP4-209ENST00000479398 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms