RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 Q6ZRP5 223 aa6□□□□□ -1.45
CCM2-210ENST00000478169 RPS10P5Q9NQ39 176 aa6□□□□□ -1.45
CCM2-210ENST00000478169 TRAV1-1A0A0B4J248 108 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 GAS8-AS1O95177 125 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 NTF3P20783 257 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 AMMECR1LQ6DCA0 310 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 LYZL1Q6UWQ5 148 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 C11orf52Q96A22 123 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 SMIM12Q96EX1 92 aa5.99□□□□□ -1.45
CCM2-210ENST00000478169 NCR2O95944 276 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 FOXI1Q12951 378 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 FAM74A3Q4VXF1 159 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 CENPWQ5EE01 88 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 ANAPC16Q96DE5 110 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 MANBALQ9NQG1 85 aa5.98□□□□□ -1.45
CCM2-210ENST00000478169 IGHV1-58A0A0C4DH39 117 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 ZNF25P17030 456 aaPredicted RBP5.97□□□□□ -1.45
CCM2-210ENST00000478169 GNG4P50150 75 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 CCL20P78556 96 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 RNASEKQ6P5S7 137 aaKnown RBP5.97□□□□□ -1.45
CCM2-210ENST00000478169 GATD1Q8NB37 220 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 OR5A1Q8NGJ0 315 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 CARD19Q96LW7 228 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 CNFNQ9BYD5 112 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 CTDSP1Q9GZU7 261 aa5.97□□□□□ -1.45
CCM2-210ENST00000478169 C7orf77A4D0Y5 90 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 APCSP02743 223 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 SMIM6P0DI80 62 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 FGF6P10767 208 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 CTRLP40313 264 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 AKR1D1P51857 326 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 TWIST1Q15672 202 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 TMEM242Q9NWH2 141 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 GNG13Q9P2W3 67 aa5.96□□□□□ -1.46
CCM2-210ENST00000478169 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.95□□□□□ -1.46
CCM2-210ENST00000478169 TMEM238LA0A1B0GVL6 79 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 IGKV2-29A2NJV5 120 aaPredicted RBP5.95□□□□□ -1.46
CCM2-210ENST00000478169 FAM231BA6NCW3 169 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 ADCYAP1P18509 176 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 S100PP25815 95 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 XCL1P47992 114 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 LINC00518Q8N0U6 118 aa5.95□□□□□ -1.46
CCM2-210ENST00000478169 TRAV26-2A0A0B4J265 109 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 LINC00959A0A1B0GUT2 108 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 COLCA2A8K830 154 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 CCL25O15444 150 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 RAB5AP20339 215 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 PTTG1IPP53801 180 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 SYCNQ0VAF6 134 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 CBLN2Q8IUK8 224 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 NUDT10Q8NFP7 164 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 ISOC2Q96AB3 205 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 RPL39LQ96EH5 51 aaKnown RBP5.94□□□□□ -1.46
CCM2-210ENST00000478169 LINC00526Q96FQ7 95 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 NUDT11Q96G61 164 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 TMEM101Q96IK0 257 aa5.94□□□□□ -1.46
CCM2-210ENST00000478169 LPAP08519 4548 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 TRBV20OR9-2A0A075B6H5 130 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 LOC107984640A0A0U1RRK4 108 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 SDHAF1A6NFY7 115 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 TMEM250H0YL14 139 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 I3L3M4 83 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 PDE6DO43924 150 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 S100A2P29034 98 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
CCM2-210ENST00000478169 MEF2BQ02080 365 aaPredicted RBP5.93□□□□□ -1.46
CCM2-210ENST00000478169 SS18Q15532 418 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 XP32Q5T750 250 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 CD164L2Q6UWJ8 174 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 SMIM15Q7Z3B0 74 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 ZNF664Q8N3J9 261 aa5.93□□□□□ -1.46
CCM2-210ENST00000478169 PPP1R2P9O14990 202 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 SRP19P09132 144 aaKnown RBP5.92□□□□□ -1.46
CCM2-210ENST00000478169 BCL2P10415 239 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 ESDP10768 282 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 PMCHP20382 165 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 CAMPP49913 170 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 GAGE2BQ13066 116 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
CCM2-210ENST00000478169 PSORS1C2Q9UIG4 136 aa5.92□□□□□ -1.46
CCM2-210ENST00000478169 TRBV6-5A0A0K0K1A5 114 aa5.91□□□□□ -1.46
CCM2-210ENST00000478169 MT-ND6P03923 174 aa5.91□□□□□ -1.46
CCM2-210ENST00000478169 MRPL52Q86TS9 123 aaKnown RBP5.91□□□□□ -1.46
CCM2-210ENST00000478169 C12orf57Q99622 126 aa5.91□□□□□ -1.46
CCM2-210ENST00000478169 CDC42SE2Q9NRR3 84 aa5.91□□□□□ -1.46
CCM2-210ENST00000478169 NAT8Q9UHE5 227 aa5.91□□□□□ -1.46
CCM2-210ENST00000478169 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 A0A1W2PNN7 141 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 C5orf52A6NGY3 159 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 ZNF727A8MUV8 499 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 CEBPGP53567 150 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 FOXA3P55318 350 aaPredicted RBP5.9□□□□□ -1.46
CCM2-210ENST00000478169 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 NUP35Q8NFH5 326 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 MRAP2Q96G30 205 aa5.9□□□□□ -1.46
CCM2-210ENST00000478169 APOMO95445 188 aa5.89□□□□□ -1.47
CCM2-210ENST00000478169 TSHBP01222 138 aa5.89□□□□□ -1.47
CCM2-210ENST00000478169 MALP21145 153 aa5.89□□□□□ -1.47
CCM2-210ENST00000478169 C9orf116Q5BN46 136 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms