RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 TTC28Q96AY4 2481 aa7.67□□□□□ -1.18
ABCF1-205ENST00000475993 DCHS2Q6V1P9 2916 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 IGKV3-7A0A075B6H7 116 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 TMEM89A2RUT3 159 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 Q6JHZ5 121 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 IGLV5-45A0A087WSX0 123 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 LINC00846Q9NV44 126 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
ABCF1-205ENST00000475993 H7BZZ5 65 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 RBM3P98179 157 aaKnown RBP7.65□□□□□ -1.18
ABCF1-205ENST00000475993 CDKN2A-AS1Q9UH64 79 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 DEFB123Q8N688 67 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 COPS9Q8WXC6 57 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 MED13LQ71F56 2210 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 PIEZO2Q9H5I5 2752 aa7.65□□□□□ -1.18
ABCF1-205ENST00000475993 WFDC9Q8NEX5 89 aa7.65□□□□□ -1.19
ABCF1-205ENST00000475993 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.19
ABCF1-205ENST00000475993 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.19
ABCF1-205ENST00000475993 RHPN1-AS1Q9BWJ2 59 aa7.65□□□□□ -1.19
ABCF1-205ENST00000475993 APC2O95996 2303 aa7.64□□□□□ -1.19
ABCF1-205ENST00000475993 Q9H8V8 135 aa7.64□□□□□ -1.19
ABCF1-205ENST00000475993 DMXL1Q9Y485 3027 aa7.64□□□□□ -1.19
ABCF1-205ENST00000475993 IGLV5-39A0A0G2JS06 123 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 ZFP36P26651 326 aaKnown RBP7.63□□□□□ -1.19
ABCF1-205ENST00000475993 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.63□□□□□ -1.19
ABCF1-205ENST00000475993 Q9HAA7 133 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 C14orf132Q9NPU4 83 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 PTPRQQ9UMZ3 2332 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 CACNA1HO95180 2353 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 IGHV1OR15-1A0A075B7D0 117 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 TRBV7-6A0A0J9YX20 115 aa7.63□□□□□ -1.19
ABCF1-205ENST00000475993 RPL28P46779 137 aaKnown RBP7.63□□□□□ -1.19
ABCF1-205ENST00000475993 OBSCN-AS1Q96MR7 158 aa7.62□□□□□ -1.19
ABCF1-205ENST00000475993 CCKP06307 115 aa7.62□□□□□ -1.19
ABCF1-205ENST00000475993 HIST2H2BCQ6DN03 193 aa7.62□□□□□ -1.19
ABCF1-205ENST00000475993 HIST2H2BDQ6DRA6 164 aa7.62□□□□□ -1.19
ABCF1-205ENST00000475993 SAA4P35542 130 aa7.61□□□□□ -1.19
ABCF1-205ENST00000475993 C9orf129Q5T035 196 aaKnown RBP7.61□□□□□ -1.19
ABCF1-205ENST00000475993 BPESC1Q9GZL8 116 aa7.61□□□□□ -1.19
ABCF1-205ENST00000475993 SNRPD3P62318 126 aaKnown RBP7.61□□□□□ -1.19
ABCF1-205ENST00000475993 ZNF625Q96I27 306 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-205ENST00000475993 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
ABCF1-205ENST00000475993 LRBAP50851 2863 aa7.61□□□□□ -1.19
ABCF1-205ENST00000475993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-205ENST00000475993 IGKV2-29A2NJV5 120 aaPredicted RBP7.61□□□□□ -1.19
ABCF1-205ENST00000475993 ZNF561-AS1K7EIQ3 104 aa7.61□□□□□ -1.19
ABCF1-205ENST00000475993 SVEP1Q4LDE5 3571 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 HOXD3P31249 432 aaPredicted RBP7.6□□□□□ -1.19
ABCF1-205ENST00000475993 PROK1P58294 105 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 COX6A2Q02221 97 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 S100A7L2Q5SY68 101 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 LINC00467Q9BRT7 94 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 LINC01560Q8TB33 94 aa7.6□□□□□ -1.19
ABCF1-205ENST00000475993 PF4P02776 101 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 OVOL2Q9BRP0 275 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 RIF1Q5UIP0 2472 aaKnown RBP7.59□□□□□ -1.19
ABCF1-205ENST00000475993 IGHV3-73A0A0B4J1V6 119 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 F8WEM9 126 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 USMG5Q96IX5 58 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 Q9UF83 564 aa7.59□□□□□ -1.19
ABCF1-205ENST00000475993 IGHV3-11P01762 117 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 RMI2Q96E14 147 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 BDP1A6H8Y1 2624 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 BSNQ9UPA5 3926 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 PTPRZ1P23471 2315 aaPredicted RBP7.58□□□□□ -1.2
ABCF1-205ENST00000475993 MOB4Q9Y3A3 225 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 RELNP78509 3460 aa7.58□□□□□ -1.2
ABCF1-205ENST00000475993 TRAV13-2A0A0B4J235 113 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 SMIM1B2RUZ4 78 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 IGKV3-20P01619 116 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 A0A087WYN8 130 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 CD164Q04900 197 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 SPINK13Q1W4C9 94 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 PIK3CD-AS1Q5SR53 167 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 LINC00242Q5T6M2 205 aa7.57□□□□□ -1.2
ABCF1-205ENST00000475993 H3BUA1 57 aa7.56□□□□□ -1.2
ABCF1-205ENST00000475993 FAM19A3Q7Z5A8 133 aa7.56□□□□□ -1.2
ABCF1-205ENST00000475993 K7EMT4 169 aa7.56□□□□□ -1.2
ABCF1-205ENST00000475993 ENHOQ6UWT2 76 aa7.56□□□□□ -1.2
ABCF1-205ENST00000475993 Q6ZSN1 163 aa7.56□□□□□ -1.2
ABCF1-205ENST00000475993 PAX4O43316 350 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 C11orf71Q6IPW1 123 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 CRPP02741 224 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 FAM229BQ4G0N7 80 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 C4orf48Q5BLP8 95 aa7.55□□□□□ -1.2
ABCF1-205ENST00000475993 ATMQ13315 3056 aa7.54□□□□□ -1.2
ABCF1-205ENST00000475993 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
ABCF1-205ENST00000475993 IGKV2-28A0A075B6P5 120 aa7.54□□□□□ -1.2
ABCF1-205ENST00000475993 IGKV2D-28P01615 120 aa7.54□□□□□ -1.2
ABCF1-205ENST00000475993 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
ABCF1-205ENST00000475993 H0YGX0 51 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 GRNP28799 593 aaKnown RBP7.53□□□□□ -1.2
ABCF1-205ENST00000475993 DEFB124Q8NES8 71 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 IGHV3-38A0A0C4DH36 116 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 DGAT2L7PQ6IED9 249 aa7.53□□□□□ -1.2
ABCF1-205ENST00000475993 Q8NA96 180 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms