RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 Q8N976 141 aa10.25□□□□□ -0.77
MCF2L-224ENST00000475524 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
MCF2L-224ENST00000475524 CDC42SE2Q9NRR3 84 aa10.25□□□□□ -0.77
MCF2L-224ENST00000475524 PDZD11Q5EBL8 140 aa10.24□□□□□ -0.77
MCF2L-224ENST00000475524 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
MCF2L-224ENST00000475524 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-224ENST00000475524 TRAV8-3A0A0A6YYJ7 113 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 CCL25O15444 150 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 ATP5LO75964 103 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 Q8N3U1 123 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 SCGB3A1Q96QR1 104 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 KLK12Q9UKR0 248 aa10.23□□□□□ -0.77
MCF2L-224ENST00000475524 IGLV4-3A0A075B6K6 122 aa10.22□□□□□ -0.77
MCF2L-224ENST00000475524 CRPP02741 224 aa10.22□□□□□ -0.77
MCF2L-224ENST00000475524 NDUFA6P56556 154 aa10.22□□□□□ -0.77
MCF2L-224ENST00000475524 MIAQ16674 131 aa10.22□□□□□ -0.77
MCF2L-224ENST00000475524 Q6ZN92 141 aa10.22□□□□□ -0.77
MCF2L-224ENST00000475524 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.77
MCF2L-224ENST00000475524 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-224ENST00000475524 REG3AQ06141 175 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 Q6ZUT4 128 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 NFE4Q86UQ8 179 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 LINC00269Q8N2A0 174 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 FAM104AQ969W3 186 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 RMI2Q96E14 147 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 KRTAP1-5Q9BYS1 174 aa10.21□□□□□ -0.77
MCF2L-224ENST00000475524 NUPR1O60356 82 aa10.2□□□□□ -0.78
MCF2L-224ENST00000475524 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
MCF2L-224ENST00000475524 AMELXQ99217 191 aa10.2□□□□□ -0.78
MCF2L-224ENST00000475524 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
MCF2L-224ENST00000475524 S100A6P06703 90 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 ENHOQ6UWT2 76 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 TEX43Q6ZNM6 134 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 UBE2WQ96B02 151 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 HSPB8Q9UJY1 196 aa10.19□□□□□ -0.78
MCF2L-224ENST00000475524 ALMS1Q8TCU4 4167 aa10.18□□□□□ -0.78
MCF2L-224ENST00000475524 LEPROTL1O95214 131 aa10.18□□□□□ -0.78
MCF2L-224ENST00000475524 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
MCF2L-224ENST00000475524 VCX2Q9H322 139 aa10.18□□□□□ -0.78
MCF2L-224ENST00000475524 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
MCF2L-224ENST00000475524 C6orf223Q8N319 242 aa10.17□□□□□ -0.78
MCF2L-224ENST00000475524 IFI27L1Q96BM0 104 aa10.17□□□□□ -0.78
MCF2L-224ENST00000475524 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
MCF2L-224ENST00000475524 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 PMVKQ15126 192 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 SS18Q15532 418 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 FAM19A3Q7Z5A8 133 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
MCF2L-224ENST00000475524 C1orf43Q9BWL3 253 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 VPS13DQ5THJ4 4388 aa10.16□□□□□ -0.78
MCF2L-224ENST00000475524 IFITM10A6NMD0 228 aa10.15□□□□□ -0.78
MCF2L-224ENST00000475524 M0R2N4 97 aa10.15□□□□□ -0.78
MCF2L-224ENST00000475524 SEC11AP67812 179 aa10.15□□□□□ -0.78
MCF2L-224ENST00000475524 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
MCF2L-224ENST00000475524 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
MCF2L-224ENST00000475524 CLPSL2Q6UWE3 100 aa10.14□□□□□ -0.79
MCF2L-224ENST00000475524 C5orf52A6NGY3 159 aa10.13□□□□□ -0.79
MCF2L-224ENST00000475524 UBE2D1P51668 147 aa10.13□□□□□ -0.79
MCF2L-224ENST00000475524 RNASE13Q5GAN3 156 aaKnown RBP10.13□□□□□ -0.79
MCF2L-224ENST00000475524 Q6ZRN7 208 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-224ENST00000475524 HIST3H2BBQ8N257 126 aa10.13□□□□□ -0.79
MCF2L-224ENST00000475524 CST9LQ9H4G1 147 aa10.13□□□□□ -0.79
MCF2L-224ENST00000475524 Q9HAA7 133 aa10.13□□□□□ -0.79
MCF2L-224ENST00000475524 IGKV2D-24A0A075B6R9 120 aa10.12□□□□□ -0.79
MCF2L-224ENST00000475524 KRTAP26-1Q6PEX3 210 aa10.12□□□□□ -0.79
MCF2L-224ENST00000475524 TRAV13-1A0A0B4J241 112 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 IGKV3OR2-268A0A0C4DH90 116 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 PRSS1P07477 247 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 FABP4P15090 132 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 S100A2P29034 98 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 CD164L2Q6UWJ8 174 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 SPATA12Q7Z6I5 190 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 CHCHD10Q8WYQ3 142 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-224ENST00000475524 MAP1LC3CQ9BXW4 147 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 DNAH1Q9P2D7 4330 aa10.11□□□□□ -0.79
MCF2L-224ENST00000475524 PRSS29PA6NIE9 313 aa10.1□□□□□ -0.79
MCF2L-224ENST00000475524 SNRPEP62304 92 aaKnown RBP10.1□□□□□ -0.79
MCF2L-224ENST00000475524 LINC00242Q5T6M2 205 aa10.1□□□□□ -0.79
MCF2L-224ENST00000475524 LYSTQ99698 3801 aa10.1□□□□□ -0.79
MCF2L-224ENST00000475524 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
MCF2L-224ENST00000475524 HERVK_113P63121 156 aa10.09□□□□□ -0.79
MCF2L-224ENST00000475524 IGLV10-54A0A075B6I4 117 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 PSCAO43653 123 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 IGLC3P0DOY3 106 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 FOXI1Q12951 378 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 HIST1H2BLQ99880 126 aa10.08□□□□□ -0.8
MCF2L-224ENST00000475524 IGLV5-45A0A087WSX0 123 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 F8VRH5 84 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 XCL1P47992 114 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 PET117Q6UWS5 81 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 LINC00336Q6ZUF6 198 aa10.07□□□□□ -0.8
MCF2L-224ENST00000475524 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
MCF2L-224ENST00000475524 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms