RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 IGLV5-39A0A0G2JS06 123 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 INAFM2P0DMQ5 153 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 ATP5J2P56134 94 aa13.47□□□□□ -0.25
ECHDC1-214ENST00000474289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.46□□□□□ -0.255e-8■■■■■ 27.8
ECHDC1-214ENST00000474289 SMIM9A6NGZ8 99 aa13.45□□□□□ -0.26
ECHDC1-214ENST00000474289 H3BUX3 64 aa13.45□□□□□ -0.26
ECHDC1-214ENST00000474289 ATOX1O00244 68 aa13.45□□□□□ -0.26
ECHDC1-214ENST00000474289 PRM2P04554 102 aa13.45□□□□□ -0.26
ECHDC1-214ENST00000474289 CYSTM1Q9H1C7 97 aa13.45□□□□□ -0.26
ECHDC1-214ENST00000474289 hADV29S1A0JD25 119 aa13.44□□□□□ -0.26
ECHDC1-214ENST00000474289 Q9HAA7 133 aa13.44□□□□□ -0.26
ECHDC1-214ENST00000474289 CRYBG3Q68DQ2 2970 aa13.44□□□□□ -0.26
ECHDC1-214ENST00000474289 CREBBPQ92793 2442 aa13.44□□□□□ -0.26
ECHDC1-214ENST00000474289 IGHV3OR16-12A0A075B7B8 117 aa13.43□□□□□ -0.26
ECHDC1-214ENST00000474289 COPS9Q8WXC6 57 aa13.43□□□□□ -0.26
ECHDC1-214ENST00000474289 MAP1AP78559 2803 aaPredicted RBP13.43□□□□□ -0.26
ECHDC1-214ENST00000474289 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
ECHDC1-214ENST00000474289 KLRB1Q12918 225 aa13.43□□□□□ -0.26
ECHDC1-214ENST00000474289 NBL1P41271 181 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 CFHR3Q02985 330 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 HIVEP3Q5T1R4 2406 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 A6NDX4 124 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 MALP21145 153 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 LINC00242Q5T6M2 205 aa13.42□□□□□ -0.26
ECHDC1-214ENST00000474289 RNF152Q8N8N0 203 aa13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 SMIM1B2RUZ4 78 aa13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 RPS28P62857 69 aaKnown RBP13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 DGAT2L7PQ6IED9 249 aa13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 PRORYQ9H606 182 aa13.41□□□□□ -0.26
ECHDC1-214ENST00000474289 HOXD3P31249 432 aaPredicted RBP13.4□□□□□ -0.26
ECHDC1-214ENST00000474289 TRAV13-1A0A0B4J241 112 aa13.4□□□□□ -0.26
ECHDC1-214ENST00000474289 PIK3CD-AS1Q5SR53 167 aa13.4□□□□□ -0.26
ECHDC1-214ENST00000474289 RS1O15537 224 aa13.39□□□□□ -0.27
ECHDC1-214ENST00000474289 RPL18AQ02543 176 aaKnown RBP13.39□□□□□ -0.27
ECHDC1-214ENST00000474289 HIST2H2BCQ6DN03 193 aa13.39□□□□□ -0.27
ECHDC1-214ENST00000474289 HIST2H2BDQ6DRA6 164 aa13.39□□□□□ -0.27
ECHDC1-214ENST00000474289 C9orf129Q5T035 196 aaKnown RBP13.38□□□□□ -0.27
ECHDC1-214ENST00000474289 DNAL4O96015 105 aa13.37□□□□□ -0.27
ECHDC1-214ENST00000474289 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
ECHDC1-214ENST00000474289 IGHV3-53P01767 116 aa13.36□□□□□ -0.27
ECHDC1-214ENST00000474289 PSMB8P28062 276 aa13.36□□□□□ -0.27
ECHDC1-214ENST00000474289 SYNJ2BPP57105 145 aa13.36□□□□□ -0.27
ECHDC1-214ENST00000474289 C10orf99Q6UWK7 81 aa13.36□□□□□ -0.27
ECHDC1-214ENST00000474289 IGKV3D-7A0A0C4DH55 119 aa13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 RPL28P46779 137 aaKnown RBP13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 C19orf84I3L1E1 186 aa13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 ZNF415Q09FC8 603 aa13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 KIR2DL5BQ8NHK3 375 aa13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 C14orf132Q9NPU4 83 aa13.35□□□□□ -0.27
ECHDC1-214ENST00000474289 OR13C6PQ8NH95 151 aa13.34□□□□□ -0.27
ECHDC1-214ENST00000474289 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
ECHDC1-214ENST00000474289 A0A087WVE0 104 aa13.33□□□□□ -0.28
ECHDC1-214ENST00000474289 A0A087WYN8 130 aa13.33□□□□□ -0.28
ECHDC1-214ENST00000474289 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.28
ECHDC1-214ENST00000474289 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
ECHDC1-214ENST00000474289 TRAV13-2A0A0B4J235 113 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 CRPP02741 224 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 TMEM258P61165 79 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 SERP2Q8N6R1 65 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 UPK3BQ9BT76 320 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 LINC00846Q9NV44 126 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 CSMD2Q7Z408 3487 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 F5H768 121 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 PF4P02776 101 aa13.32□□□□□ -0.28
ECHDC1-214ENST00000474289 Q6JHZ5 121 aa13.31□□□□□ -0.28
ECHDC1-214ENST00000474289 RBMY1BA6NDE4 496 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-214ENST00000474289 RBMY1EA6NEQ0 496 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-214ENST00000474289 RBMY1DP0C7P1 496 aaKnown RBP13.31□□□□□ -0.28
ECHDC1-214ENST00000474289 CSPG4Q6UVK1 2322 aa13.31□□□□□ -0.28
ECHDC1-214ENST00000474289 IGKV2-28A0A075B6P5 120 aa13.3□□□□□ -0.28
ECHDC1-214ENST00000474289 IGKV2D-28P01615 120 aa13.3□□□□□ -0.28
ECHDC1-214ENST00000474289 LINC01561Q8N1V8 128 aa13.3□□□□□ -0.28
ECHDC1-214ENST00000474289 OXTP01178 125 aa13.29□□□□□ -0.28
ECHDC1-214ENST00000474289 DEFB131AP59861 70 aa13.29□□□□□ -0.28
ECHDC1-214ENST00000474289 C11orf72Q8NBR9 251 aa13.29□□□□□ -0.28
ECHDC1-214ENST00000474289 OBSCN-AS1Q96MR7 158 aa13.28□□□□□ -0.28
ECHDC1-214ENST00000474289 DSCR8Q96T75 97 aa13.28□□□□□ -0.28
ECHDC1-214ENST00000474289 OVOL2Q9BRP0 275 aa13.28□□□□□ -0.28
ECHDC1-214ENST00000474289 SMIM11BQ8TCY0 68 aa13.28□□□□□ -0.28
ECHDC1-214ENST00000474289 Q96MF0 132 aa13.28□□□□□ -0.28
ECHDC1-214ENST00000474289 USP17L23D6RBM5 183 aa13.27□□□□□ -0.29
ECHDC1-214ENST00000474289 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
ECHDC1-214ENST00000474289 SND1-IT1Q9HBX3 110 aa13.26□□□□□ -0.29
ECHDC1-214ENST00000474289 AVPP01185 164 aa13.25□□□□□ -0.29
ECHDC1-214ENST00000474289 A8MTW9 85 aa13.25□□□□□ -0.29
ECHDC1-214ENST00000474289 C2CD3Q4AC94 2353 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 TMEM89A2RUT3 159 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 NCR3O14931 201 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 WIPF1O43516 503 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 UCNP55089 124 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 CDC42SE2Q9NRR3 84 aa13.24□□□□□ -0.29
ECHDC1-214ENST00000474289 NTM-AS1Q6ZSK4 140 aa13.23□□□□□ -0.29
ECHDC1-214ENST00000474289 IGHV4-30-2A0A087WSY4 118 aa13.23□□□□□ -0.29
ECHDC1-214ENST00000474289 C10orf105Q8TEF2 133 aa13.23□□□□□ -0.29
ECHDC1-214ENST00000474289 CUBNO60494 3623 aa13.22□□□□□ -0.29
ECHDC1-214ENST00000474289 LECT2O14960 151 aa13.22□□□□□ -0.29
ECHDC1-214ENST00000474289 SPG11Q96JI7 2443 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms