RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 ZNF664Q8N3J9 261 aa8.24□□□□□ -1.09
DDX56-209ENST00000473924 PRSS3P2Q8NHM4 247 aa8.24□□□□□ -1.09
DDX56-209ENST00000473924 ALKBH7Q9BT30 221 aaPredicted RBP8.24□□□□□ -1.09
DDX56-209ENST00000473924 UBE2D4Q9Y2X8 147 aa8.24□□□□□ -1.09
DDX56-209ENST00000473924 K7EMI3 77 aa8.23□□□□□ -1.09
DDX56-209ENST00000473924 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
DDX56-209ENST00000473924 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
DDX56-209ENST00000473924 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
DDX56-209ENST00000473924 CDC42SE2Q9NRR3 84 aa8.23□□□□□ -1.09
DDX56-209ENST00000473924 CSDC2Q9Y534 153 aaKnown RBP8.23□□□□□ -1.09
DDX56-209ENST00000473924 C16orf90A8MZG2 172 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 Q8N814 137 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 YPEL4Q96NS1 127 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
DDX56-209ENST00000473924 WFDC2Q14508 124 aa8.21□□□□□ -1.1
DDX56-209ENST00000473924 SS18Q15532 418 aa8.21□□□□□ -1.1
DDX56-209ENST00000473924 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
DDX56-209ENST00000473924 CYSLTR1Q9Y271 337 aa8.21□□□□□ -1.1
DDX56-209ENST00000473924 DNAH17Q9UFH2 4485 aa8.21□□□□□ -1.1
DDX56-209ENST00000473924 LINC00959A0A1B0GUT2 108 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 G0S2P27469 103 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
DDX56-209ENST00000473924 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 C2orf66Q6UXQ4 117 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 Q6ZUT4 128 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 FA2HQ7L5A8 372 aa8.2□□□□□ -1.1
DDX56-209ENST00000473924 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
DDX56-209ENST00000473924 EPPK1P58107 5090 aaKnown RBP8.2□□□□□ -1.1
DDX56-209ENST00000473924 FAT2Q9NYQ8 4349 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
DDX56-209ENST00000473924 IGLV5-52A0A0A0MRZ9 124 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 GAGE12HA6NDE8 117 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 C14orf177Q52M58 125 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 NTN5Q8WTR8 489 aaPredicted RBP8.19□□□□□ -1.1
DDX56-209ENST00000473924 BIRC6Q9NR09 4857 aa8.19□□□□□ -1.1
DDX56-209ENST00000473924 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
DDX56-209ENST00000473924 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
DDX56-209ENST00000473924 CCL25O15444 150 aa8.18□□□□□ -1.1
DDX56-209ENST00000473924 XCL1P47992 114 aa8.18□□□□□ -1.1
DDX56-209ENST00000473924 MRPS36P82909 103 aaKnown RBP8.18□□□□□ -1.1
DDX56-209ENST00000473924 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
DDX56-209ENST00000473924 PYGO1Q9Y3Y4 419 aa8.18□□□□□ -1.1
DDX56-209ENST00000473924 C1orf196B1AJZ1 125 aa8.17□□□□□ -1.1
DDX56-209ENST00000473924 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
DDX56-209ENST00000473924 HECTD4Q9Y4D8 3996 aa8.16□□□□□ -1.1
DDX56-209ENST00000473924 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
DDX56-209ENST00000473924 Q6ZN92 141 aa8.16□□□□□ -1.1
DDX56-209ENST00000473924 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
DDX56-209ENST00000473924 PKD1P98161 4303 aa8.16□□□□□ -1.1
DDX56-209ENST00000473924 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 LINC01546A6NGU7 62 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 SCO1O75880 301 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 TRGC2P03986 189 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 LINC00614P0C842 121 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 GCSHP23434 173 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 RAB5BP61020 215 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 FOXI1Q12951 378 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 CFAP161Q6P656 301 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 CD164L2Q6UWJ8 174 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 TEX43Q6ZNM6 134 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
DDX56-209ENST00000473924 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 PAPPA-AS1Q5QFB9 102 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 FAM104AQ969W3 186 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 C2orf88Q9BSF0 95 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 VCX2Q9H322 139 aa8.14□□□□□ -1.11
DDX56-209ENST00000473924 IGIPA6NJ69 53 aa8.13□□□□□ -1.11
DDX56-209ENST00000473924 COLCA2A8K830 154 aa8.13□□□□□ -1.11
DDX56-209ENST00000473924 PRSS1P07477 247 aa8.13□□□□□ -1.11
DDX56-209ENST00000473924 NPSP0C0P6 89 aa8.13□□□□□ -1.11
DDX56-209ENST00000473924 MALP21145 153 aa8.13□□□□□ -1.11
DDX56-209ENST00000473924 COX7A2LO14548 114 aa8.12□□□□□ -1.11
DDX56-209ENST00000473924 ERASQ7Z444 233 aa8.12□□□□□ -1.11
DDX56-209ENST00000473924 TIMM17AQ99595 171 aa8.12□□□□□ -1.11
DDX56-209ENST00000473924 HIGD2BQ4VC39 106 aa8.11□□□□□ -1.11
DDX56-209ENST00000473924 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
DDX56-209ENST00000473924 C15orf56Q8N910 161 aa8.11□□□□□ -1.11
DDX56-209ENST00000473924 URB1-AS1Q96HZ7 61 aa8.11□□□□□ -1.11
DDX56-209ENST00000473924 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 HBDP02042 147 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 S100A1P23297 94 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 KRTAP10-1P60331 282 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 PMCHL1Q16048 86 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 ZC2HC1BQ5TFG8 222 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 AMELXQ99217 191 aa8.1□□□□□ -1.11
DDX56-209ENST00000473924 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
DDX56-209ENST00000473924 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.09□□□□□ -1.11
DDX56-209ENST00000473924 APOMO95445 188 aa8.09□□□□□ -1.11
DDX56-209ENST00000473924 UBE2D1P51668 147 aa8.09□□□□□ -1.11
DDX56-209ENST00000473924 LINC01620Q4KN68 170 aa8.09□□□□□ -1.11
DDX56-209ENST00000473924 LINC00173Q6ZV60 143 aa8.09□□□□□ -1.11
DDX56-209ENST00000473924 CHCHD1Q96BP2 118 aaKnown RBP8.09□□□□□ -1.11
DDX56-209ENST00000473924 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms