RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 SPAG11AQ6PDA7 123 aa-0.97□□□□□ -2.56
MDM2-216ENST00000471946 AQP10Q96PS8 301 aa-0.97□□□□□ -2.56
MDM2-216ENST00000471946 TMEM191AQ9H0A3 160 aa-0.97□□□□□ -2.56
MDM2-216ENST00000471946 LENEPQ9Y5L5 61 aa-0.97□□□□□ -2.56
MDM2-216ENST00000471946 V9GYH0 126 aa-0.97□□□□□ -2.56
MDM2-216ENST00000471946 ACANP16112 2415 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 TRBV6-1A0A0K0K1D8 114 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 SPRR2BP35325 72 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 RBM3P98179 157 aaKnown RBP-0.98□□□□□ -2.57
MDM2-216ENST00000471946 C10orf128Q5T292 105 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 TCEAL4Q96EI5 215 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 SHROOM2Q13796 1616 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 PPIP5K1Q6PFW1 1433 aa-0.98□□□□□ -2.57
MDM2-216ENST00000471946 SETXQ7Z333 2677 aaKnown RBP-0.99□□□□□ -2.57
MDM2-216ENST00000471946 EP300Q09472 2414 aaPredicted RBP-0.99□□□□□ -2.57
MDM2-216ENST00000471946 SMCO1Q147U7 214 aa-0.99□□□□□ -2.57
MDM2-216ENST00000471946 BICRAQ9NZM4 1560 aa-1□□□□□ -2.57
MDM2-216ENST00000471946 TTC9CQ8N5M4 171 aa-1□□□□□ -2.57
MDM2-216ENST00000471946 AMELXQ99217 191 aa-1□□□□□ -2.57
MDM2-216ENST00000471946 PRKDCP78527 4128 aaKnown RBP-1□□□□□ -2.57
MDM2-216ENST00000471946 WDR7Q9Y4E6 1490 aa-1□□□□□ -2.57
MDM2-216ENST00000471946 LRP1BQ9NZR2 4599 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 COX17Q14061 63 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 PIGYQ3MUY2 71 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 TMEM170BQ5T4T1 132 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 DPH3Q96FX2 82 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 PDCD10Q9BUL8 212 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 CFTRP13569 1480 aa-1.01□□□□□ -2.57
MDM2-216ENST00000471946 HIST1H1DP16402 221 aaKnown RBP-1.02□□□□□ -2.57
MDM2-216ENST00000471946 Q6JHZ5 121 aa-1.02□□□□□ -2.57
MDM2-216ENST00000471946 Q8N8P6 123 aa-1.03□□□□□ -2.57
MDM2-216ENST00000471946 MAFIPQ8WZ33 124 aa-1.03□□□□□ -2.57
MDM2-216ENST00000471946 LINC00472Q9H8W2 130 aa-1.03□□□□□ -2.57
MDM2-216ENST00000471946 CCDC167Q9P0B6 97 aa-1.03□□□□□ -2.57
MDM2-216ENST00000471946 MYOM1P52179 1685 aa-1.04□□□□□ -2.58
MDM2-216ENST00000471946 RAPGEF6Q8TEU7 1601 aa-1.04□□□□□ -2.58
MDM2-216ENST00000471946 ARHGEF12Q9NZN5 1544 aa-1.05□□□□□ -2.58
MDM2-216ENST00000471946 PIGBOS1A0A0B4J2F0 54 aa-1.05□□□□□ -2.58
MDM2-216ENST00000471946 LOC730098B7Z3J9 87 aa-1.05□□□□□ -2.58
MDM2-216ENST00000471946 LSM10Q969L4 123 aaKnown RBP-1.05□□□□□ -2.58
MDM2-216ENST00000471946 C12orf73Q69YU5 71 aa-1.06□□□□□ -2.58
MDM2-216ENST00000471946 Q6AWC8 147 aa-1.06□□□□□ -2.58
MDM2-216ENST00000471946 NDUFA4L2Q9NRX3 87 aa-1.06□□□□□ -2.58
MDM2-216ENST00000471946 ARHGEF5Q12774 1597 aa-1.06□□□□□ -2.58
MDM2-216ENST00000471946 COX6B1P14854 86 aa-1.07□□□□□ -2.58
MDM2-216ENST00000471946 SPRR1BP22528 89 aa-1.07□□□□□ -2.58
MDM2-216ENST00000471946 BAGE2Q86Y30 109 aa-1.07□□□□□ -2.58
MDM2-216ENST00000471946 ROBO1Q9Y6N7 1651 aa-1.07□□□□□ -2.58
MDM2-216ENST00000471946 CHD8Q9HCK8 2581 aa-1.08□□□□□ -2.58
MDM2-216ENST00000471946 UQCR11O14957 56 aa-1.08□□□□□ -2.58
MDM2-216ENST00000471946 PFDN5Q99471 154 aa-1.08□□□□□ -2.58
MDM2-216ENST00000471946 NBEAL1Q6ZS30 2694 aa-1.08□□□□□ -2.58
MDM2-216ENST00000471946 TET3O43151 1660 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 F8VRH5 84 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 TNFP01375 233 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 APOC3P02656 99 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 ARPC4P59998 168 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 COPS9Q8WXC6 57 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 ZFHX3Q15911 3703 aa-1.09□□□□□ -2.58
MDM2-216ENST00000471946 STAB2Q8WWQ8 2551 aa-1.1□□□□□ -2.59
MDM2-216ENST00000471946 TSLPQ969D9 159 aa-1.1□□□□□ -2.59
MDM2-216ENST00000471946 SCN7AQ01118 1682 aa-1.1□□□□□ -2.59
MDM2-216ENST00000471946 TPPP2P59282 170 aa-1.11□□□□□ -2.59
MDM2-216ENST00000471946 FXYD6Q9H0Q3 95 aa-1.11□□□□□ -2.59
MDM2-216ENST00000471946 RERGLQ9H628 205 aa-1.11□□□□□ -2.59
MDM2-216ENST00000471946 DYNLRB1Q9NP97 96 aa-1.11□□□□□ -2.59
MDM2-216ENST00000471946 SERP1Q9Y6X1 66 aa-1.11□□□□□ -2.59
MDM2-216ENST00000471946 FLGP20930 4061 aaPredicted RBP-1.12□□□□□ -2.59
MDM2-216ENST00000471946 CPSF1Q10570 1443 aaKnown RBP-1.12□□□□□ -2.59
MDM2-216ENST00000471946 QRICH2Q9H0J4 1663 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 LOC105371267A0A1B0GV96 52 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 IGLC7A0M8Q6 106 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 MGST2Q99735 147 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 KIAA0556O60303 1618 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 GOLGA4Q13439 2230 aaKnown RBP-1.12□□□□□ -2.59
MDM2-216ENST00000471946 GAPVD1Q14C86 1478 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 HERC1Q15751 4861 aa-1.12□□□□□ -2.59
MDM2-216ENST00000471946 DNAJC13O75165 2243 aa-1.13□□□□□ -2.59
MDM2-216ENST00000471946 DEFB123Q8N688 67 aa-1.13□□□□□ -2.59
MDM2-216ENST00000471946 URB1O60287 2271 aaKnown RBP-1.13□□□□□ -2.59
MDM2-216ENST00000471946 CNOT1A5YKK6 2376 aaKnown RBP-1.13□□□□□ -2.59
MDM2-216ENST00000471946 CUL7Q14999 1698 aa-1.13□□□□□ -2.59
MDM2-216ENST00000471946 TRBV7-3A0A075B6L6 115 aa-1.14□□□□□ -2.59
MDM2-216ENST00000471946 LINC01558Q9Y6Z2 57 aa-1.14□□□□□ -2.59
MDM2-216ENST00000471946 TULP4Q9NRJ4 1543 aa-1.15□□□□□ -2.59
MDM2-216ENST00000471946 NUP188Q5SRE5 1749 aa-1.15□□□□□ -2.59
MDM2-216ENST00000471946 HMGN4O00479 90 aa-1.15□□□□□ -2.59
MDM2-216ENST00000471946 SNRNP25Q9BV90 132 aaKnown RBP-1.15□□□□□ -2.59
MDM2-216ENST00000471946 NSD3Q9BZ95 1437 aa-1.15□□□□□ -2.59
MDM2-216ENST00000471946 PKHD1P08F94 4074 aa-1.16□□□□□ -2.59
MDM2-216ENST00000471946 POLA1P09884 1462 aaPredicted RBP-1.16□□□□□ -2.59
MDM2-216ENST00000471946 IQSEC2Q5JU85 1478 aa-1.16□□□□□ -2.59
MDM2-216ENST00000471946 MBD5Q9P267 1494 aa-1.16□□□□□ -2.59
MDM2-216ENST00000471946 MIF4GDA9UHW6 222 aaKnown RBP-1.16□□□□□ -2.6
MDM2-216ENST00000471946 FMN2Q9NZ56 1722 aa-1.16□□□□□ -2.6
MDM2-216ENST00000471946 SVEP1Q4LDE5 3571 aa-1.16□□□□□ -2.6
MDM2-216ENST00000471946 SHANK2Q9UPX8 1470 aa-1.17□□□□□ -2.6
MDM2-216ENST00000471946 KRTAP19-8Q3LI54 63 aa-1.17□□□□□ -2.6
MDM2-216ENST00000471946 FAM25AB3EWG3 89 aa-1.18□□□□□ -2.6
MDM2-216ENST00000471946 FAM25CB3EWG5 89 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms