RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 RPS25P62851 125 aaKnown RBP-0.89□□□□□ -2.55
RBM39-228ENST00000471635 PIGYQ3MUY2 71 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 TPT1P8Q9HAU6 139 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 DOCK1Q14185 1865 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 SPEF2Q9C093 1822 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 PCLOQ9Y6V0 5065 aa-0.89□□□□□ -2.55
RBM39-228ENST00000471635 NF1P21359 2839 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 DNAJC13O75165 2243 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 COPZ1P61923 177 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 RBM3P98179 157 aaKnown RBP-0.9□□□□□ -2.55
RBM39-228ENST00000471635 TMEM170BQ5T4T1 132 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 Q6JHZ5 121 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 LZICQ8WZA0 190 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 AQP10Q96PS8 301 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 MYOM3Q5VTT5 1437 aa-0.9□□□□□ -2.55
RBM39-228ENST00000471635 LAMA5O15230 3695 aa-0.91□□□□□ -2.55
RBM39-228ENST00000471635 CEP152O94986 1710 aa-0.91□□□□□ -2.55
RBM39-228ENST00000471635 ARAP2Q8WZ64 1704 aa-0.91□□□□□ -2.55
RBM39-228ENST00000471635 LOC730098B7Z3J9 87 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 COX6B1P14854 86 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 DR1Q01658 176 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 COX17Q14061 63 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 TTC9CQ8N5M4 171 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 DPH3Q96FX2 82 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 TMEM191AQ9H0A3 160 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 COPZ2Q9P299 210 aa-0.91□□□□□ -2.56
RBM39-228ENST00000471635 PATJQ8NI35 1801 aa-0.92□□□□□ -2.56
RBM39-228ENST00000471635 WDR7Q9Y4E6 1490 aa-0.92□□□□□ -2.56
RBM39-228ENST00000471635 PKHD1P08F94 4074 aa-0.92□□□□□ -2.56
RBM39-228ENST00000471635 HIST1H1DP16402 221 aaKnown RBP-0.92□□□□□ -2.56
RBM39-228ENST00000471635 Q8N8P6 123 aa-0.92□□□□□ -2.56
RBM39-228ENST00000471635 ANP32BQ92688 251 aaKnown RBP-0.92□□□□□ -2.56
RBM39-228ENST00000471635 KIF21AQ7Z4S6 1674 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 SBF2Q86WG5 1849 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 SMCO1Q147U7 214 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 SMIM21Q3B7S5 101 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 Q6AWC8 147 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 TCEAL4Q96EI5 215 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 PPIP5K1Q6PFW1 1433 aa-0.93□□□□□ -2.56
RBM39-228ENST00000471635 HERC2O95714 4834 aa-0.94□□□□□ -2.56
RBM39-228ENST00000471635 FLGP20930 4061 aaPredicted RBP-0.94□□□□□ -2.56
RBM39-228ENST00000471635 BAGE2Q86Y30 109 aa-0.94□□□□□ -2.56
RBM39-228ENST00000471635 DEFB123Q8N688 67 aa-0.94□□□□□ -2.56
RBM39-228ENST00000471635 LSM10Q969L4 123 aaKnown RBP-0.94□□□□□ -2.56
RBM39-228ENST00000471635 NDUFA4L2Q9NRX3 87 aa-0.94□□□□□ -2.56
RBM39-228ENST00000471635 SVEP1Q4LDE5 3571 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 F8VRH5 84 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 TNFP01375 233 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 PDCD10Q9BUL8 212 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 CCDC167Q9P0B6 97 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 DOCK2Q92608 1830 aa-0.95□□□□□ -2.56
RBM39-228ENST00000471635 RIMS1Q86UR5 1692 aaKnown RBP-0.95□□□□□ -2.56
RBM39-228ENST00000471635 GRIN2AQ12879 1464 aa-0.96□□□□□ -2.56
RBM39-228ENST00000471635 UQCR11O14957 56 aa-0.96□□□□□ -2.56
RBM39-228ENST00000471635 TGP01266 2768 aa-0.96□□□□□ -2.56
RBM39-228ENST00000471635 CFTRP13569 1480 aa-0.97□□□□□ -2.56
RBM39-228ENST00000471635 PIGBOS1A0A0B4J2F0 54 aa-0.97□□□□□ -2.56
RBM39-228ENST00000471635 IGLC7A0M8Q6 106 aa-0.97□□□□□ -2.56
RBM39-228ENST00000471635 C12orf73Q69YU5 71 aa-0.97□□□□□ -2.56
RBM39-228ENST00000471635 MAFIPQ8WZ33 124 aa-0.97□□□□□ -2.56
RBM39-228ENST00000471635 APOC3P02656 99 aa-0.98□□□□□ -2.57
RBM39-228ENST00000471635 TPPP2P59282 170 aa-0.98□□□□□ -2.57
RBM39-228ENST00000471635 FXYD6Q9H0Q3 95 aa-0.98□□□□□ -2.57
RBM39-228ENST00000471635 LINC01558Q9Y6Z2 57 aa-0.98□□□□□ -2.57
RBM39-228ENST00000471635 KDM5AP29375 1690 aaKnown RBP-0.98□□□□□ -2.57
RBM39-228ENST00000471635 PCNX1Q96RV3 2341 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 M0R2T5 61 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 TSLPQ969D9 159 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 MGST2Q99735 147 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 DYNLRB1Q9NP97 96 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 SERP1Q9Y6X1 66 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 NSD3Q9BZ95 1437 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 GAPVD1Q14C86 1478 aa-0.99□□□□□ -2.57
RBM39-228ENST00000471635 USH2AO75445 5202 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 TRBV7-3A0A075B6L6 115 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 HMGN4O00479 90 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 SPINK4O60575 86 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 SPRR2AP35326 72 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 KRTAP6-2Q3LI66 62 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 COPS9Q8WXC6 57 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 RERGLQ9H628 205 aa-1□□□□□ -2.57
RBM39-228ENST00000471635 ARPC4P59998 168 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 KLK9Q2XQG4 91 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 IQSEC2Q5JU85 1478 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 SHANK2Q9UPX8 1470 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 TULP4Q9NRJ4 1543 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 ARHGEF12Q9NZN5 1544 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 BICRAQ9NZM4 1560 aa-1.01□□□□□ -2.57
RBM39-228ENST00000471635 SETD2Q9BYW2 2564 aaPredicted RBP-1.02□□□□□ -2.57
RBM39-228ENST00000471635 LOC105371267A0A1B0GV96 52 aa-1.02□□□□□ -2.57
RBM39-228ENST00000471635 POLA1P09884 1462 aaPredicted RBP-1.02□□□□□ -2.57
RBM39-228ENST00000471635 RAPGEF6Q8TEU7 1601 aa-1.02□□□□□ -2.57
RBM39-228ENST00000471635 PFDN5Q99471 154 aa-1.02□□□□□ -2.57
RBM39-228ENST00000471635 SNRNP25Q9BV90 132 aaKnown RBP-1.02□□□□□ -2.57
RBM39-228ENST00000471635 ZFHX3Q15911 3703 aa-1.02□□□□□ -2.57
RBM39-228ENST00000471635 SFT2D2O95562 160 aa-1.03□□□□□ -2.57
RBM39-228ENST00000471635 DEFB105AQ8NG35 78 aa-1.03□□□□□ -2.57
RBM39-228ENST00000471635 NEBP20929 6669 aa-1.03□□□□□ -2.57
RBM39-228ENST00000471635 PSME4Q14997 1843 aa-1.03□□□□□ -2.57
RBM39-228ENST00000471635 CPSF1Q10570 1443 aaKnown RBP-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms