RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 TAX1BP3O14907 124 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 MRPS36P82909 103 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 RPL36AP83881 106 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 COTL1Q14019 142 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 DAZ4Q86SG3 579 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 PCP2Q8IVA1 136 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 OR5A1Q8NGJ0 315 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 RPL36ALQ969Q0 106 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 PLEKHB2Q96CS7 222 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 PRADC1Q9BSG0 188 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 VCX2Q9H322 139 aa4.08□□□□□ -1.76
HDAC8-216ENST00000470998 DAZ3Q9NR90 486 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 SPANXB1Q9NS25 103 aaPredicted RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 CSDC2Q9Y534 153 aaKnown RBP4.08□□□□□ -1.76
HDAC8-216ENST00000470998 IGLV4-69A0A075B6H9 119 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 SMIM9A6NGZ8 99 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 H7C423 109 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 VAMP3Q15836 100 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 LYRM7Q5U5X0 104 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 CEND1Q8N111 149 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 OR4C5Q8NGB2 326 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 AMELXQ99217 191 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 JPT2Q9H910 190 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 TP73-AS1Q9UF72 201 aa4.07□□□□□ -1.76
HDAC8-216ENST00000470998 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 TRBV7-3A0A075B6L6 115 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 IGKV2D-26A0A0A0MRZ7 120 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 TRAV8-6A0A0B4J262 113 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 A0A1B0GWB2 263 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 TRBV6-4A0A1B0GX49 114 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 ZNF815PA8K554 130 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 K7EQD1 137 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 LEPROTO15243 131 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 AZU1P20160 251 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 RRN3P1Q2M238 152 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 SCGB1D4Q6XE38 83 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 Q6ZVH6 145 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 OVOL2Q9BRP0 275 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 GTSF1LQ9H1H1 148 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 XCL2Q9UBD3 114 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 SELENOKQ9Y6D0 94 aa4.06□□□□□ -1.76
HDAC8-216ENST00000470998 DNAH9Q9NYC9 4486 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 TINCRA0A1B0GVN0 87 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 TMEM238C9JI98 176 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 C3orf84H3BNL1 204 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 SPRY2O43597 315 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 P0DMU3 169 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 FAM231AP0DMU4 169 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 FAM231CP0DMU5 169 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 FABP2P12104 132 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 HTN1P15515 57 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
HDAC8-216ENST00000470998 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
HDAC8-216ENST00000470998 TMEM170BQ5T4T1 132 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 NEGR1Q7Z3B1 354 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 KIR2DL5BQ8NHK3 375 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 COPS9Q8WXC6 57 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 LINC00476Q8WZB0 136 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 HIST1H4GQ99525 98 aa4.05□□□□□ -1.76
HDAC8-216ENST00000470998 TGP01266 2768 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 IGLV5-45A0A087WSX0 123 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 TMEM223A0PJW6 202 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 GAGE10A6NGK3 116 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 A8MZ25 164 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 J3QQQ9 107 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 K7EP13 123 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 K7EP34 96 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
HDAC8-216ENST00000470998 APOC4P55056 127 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 TIRAPP58753 221 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 FAM19A3Q7Z5A8 133 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 CHCHD7Q9BUK0 85 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 C1orf43Q9BWL3 253 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 PPDPFQ9H3Y8 114 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
HDAC8-216ENST00000470998 UBE2D4Q9Y2X8 147 aa4.04□□□□□ -1.76
HDAC8-216ENST00000470998 TRGV2A0A075B6R0 118 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.03□□□□□ -1.76
HDAC8-216ENST00000470998 A0A0J9YY99 117 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 TEX48A0A1B0GUV7 120 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 A0A1W2PPM0 123 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 LYRM9A8MSI8 78 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 TRIAP1O43715 76 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 TIMM17BO60830 172 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 FXYD2P54710 66 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 UBE2D3P61077 147 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 UBE2D2P62837 147 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 HERVK_113P63121 156 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 FOXI1Q12951 378 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 DGAT2L7PQ6IED9 249 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 LINC00612Q8N6U2 182 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 SLC25A29Q8N8R3 303 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 CSNK1G2-AS1Q8NCQ2 148 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 RNF183Q96D59 192 aa4.03□□□□□ -1.76
HDAC8-216ENST00000470998 KMT2CQ8NEZ4 4911 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms