RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 RNASE4P34096 147 aaKnown RBP3.44□□□□□ -1.86
RBM39-227ENST00000470563 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
RBM39-227ENST00000470563 SYNJ2BPP57105 145 aa3.44□□□□□ -1.86
RBM39-227ENST00000470563 ZFP2Q6ZN57 461 aa3.44□□□□□ -1.86
RBM39-227ENST00000470563 ZFAND2AQ8N6M9 145 aa3.44□□□□□ -1.86
RBM39-227ENST00000470563 TMEM223A0PJW6 202 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 NDUFA4O00483 81 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 CRYGDP07320 174 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 MGPP08493 103 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 UBE2E1P51965 193 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 GPHB5Q86YW7 130 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 TMEM263Q8WUH6 116 aaKnown RBP3.43□□□□□ -1.86
RBM39-227ENST00000470563 USMG5Q96IX5 58 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 AMELXQ99217 191 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 TP53TG1Q9Y2A0 90 aa3.43□□□□□ -1.86
RBM39-227ENST00000470563 URB1O60287 2271 aaKnown RBP3.42□□□□□ -1.86
RBM39-227ENST00000470563 MUC4Q99102 2169 aa3.42□□□□□ -1.86
RBM39-227ENST00000470563 TRAV26-2A0A0B4J265 109 aa3.42□□□□□ -1.86
RBM39-227ENST00000470563 RNF182Q8N6D2 247 aa3.42□□□□□ -1.86
RBM39-227ENST00000470563 REV3LO60673 3130 aa3.42□□□□□ -1.86
RBM39-227ENST00000470563 ABCA1O95477 2261 aa3.42□□□□□ -1.86
RBM39-227ENST00000470563 PRRC2AP48634 2157 aaKnown RBP3.42□□□□□ -1.86
RBM39-227ENST00000470563 TRAV2A0A0B4J234 112 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 RNASE3P12724 160 aaKnown RBP3.41□□□□□ -1.86
RBM39-227ENST00000470563 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
RBM39-227ENST00000470563 MRPS36P82909 103 aaKnown RBP3.41□□□□□ -1.86
RBM39-227ENST00000470563 CLEC19AQ6UXS0 136 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 C15orf53Q8NAA6 179 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 PTH2Q96A98 100 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
RBM39-227ENST00000470563 ICOSQ9Y6W8 199 aa3.41□□□□□ -1.86
RBM39-227ENST00000470563 TRAV41A0A0B4J266 112 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 I3L3M4 83 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 LST1O00453 97 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 INAFM2P0DMQ5 153 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 LINC00315P59091 139 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 DNAH14Q0VDD8 3507 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 MIAQ16674 131 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 FAM222AQ5U5X8 452 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 C2orf82Q6UX34 121 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 MRPL55Q7Z7F7 128 aaKnown RBP3.4□□□□□ -1.87
RBM39-227ENST00000470563 LINC00643Q86TS7 51 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 C5orf56Q8N8D9 126 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 Q8N9L7 120 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 CAMK2N2Q96S95 79 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 PRORYQ9H606 182 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 SS18L2Q9UHA2 77 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 S4R3C0 116 aa3.4□□□□□ -1.87
RBM39-227ENST00000470563 POLEQ07864 2286 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 TRAV4A0A0B4J268 109 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 IGHV1-58A0A0C4DH39 117 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 TINCRA0A1B0GVN0 87 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 A0A1B0GX51 115 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 UQCRQO14949 82 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 TRACP01848 142 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 TLX1NBP0CAT3 122 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 TSPEAR-AS2P59090 65 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 CIRBPQ14011 172 aaKnown RBP3.39□□□□□ -1.87
RBM39-227ENST00000470563 PRR9Q5T870 116 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 MUSTN1Q8IVN3 82 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 DAND5Q8N907 189 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 DEFB124Q8NES8 71 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 ZNRF2Q8NHG8 242 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 DNAJC30Q96LL9 226 aa3.39□□□□□ -1.87
RBM39-227ENST00000470563 A0A0J9YXV3 536 aa3.38□□□□□ -1.87
RBM39-227ENST00000470563 M0QY20 66 aa3.38□□□□□ -1.87
RBM39-227ENST00000470563 NPFFO15130 113 aa3.38□□□□□ -1.87
RBM39-227ENST00000470563 IGHV3-30-3P0DP02 117 aa3.38□□□□□ -1.87
RBM39-227ENST00000470563 CEMP1Q6PRD7 247 aaPredicted RBP3.38□□□□□ -1.87
RBM39-227ENST00000470563 SDIM1Q6ZPB5 146 aa3.38□□□□□ -1.87
RBM39-227ENST00000470563 DAZ1Q9NQZ3 744 aaKnown RBP3.38□□□□□ -1.87
RBM39-227ENST00000470563 NACAE9PAV3 2078 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 ATOX1O00244 68 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 BPY2O14599 106 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 NDUFA1O15239 70 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 IGHG2P01859 326 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 SNRPD3P62318 126 aaKnown RBP3.37□□□□□ -1.87
RBM39-227ENST00000470563 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
RBM39-227ENST00000470563 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
RBM39-227ENST00000470563 ZNF56Q15929 161 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 MEIG1Q5JSS6 88 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 Q5W150 140 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 NDUFA12Q9UI09 145 aa3.37□□□□□ -1.87
RBM39-227ENST00000470563 PKDREJQ9NTG1 2253 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 TEX49A0A1B0GTD5 131 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 A8MTW9 85 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 J3KT08 172 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 COX7A2LO14548 114 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 CD28P10747 220 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 RPL18AQ02543 176 aaKnown RBP3.36□□□□□ -1.87
RBM39-227ENST00000470563 SFTA2Q6UW10 78 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 C3orf22Q8N5N4 141 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 LINC00526Q96FQ7 95 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 LINC00467Q9BRT7 94 aa3.36□□□□□ -1.87
RBM39-227ENST00000470563 CDH23Q9H251 3354 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms