RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 TIMM21Q9BVV7 248 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 TM2D2Q9BX73 214 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 COX11Q9Y6N1 276 aa9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-203ENST00000470278 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 COLCA2A8K830 154 aa9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 S100A1P23297 94 aa9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 REG3AQ06141 175 aa9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 TMEM101Q96IK0 257 aa9.97□□□□□ -0.81
CDC42SE1-203ENST00000470278 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
CDC42SE1-203ENST00000470278 SPANXA1Q9NS26 97 aa9.96□□□□□ -0.82
CDC42SE1-203ENST00000470278 ATP6V1G1O75348 118 aa9.95□□□□□ -0.82
CDC42SE1-203ENST00000470278 TNP2Q05952 138 aa9.95□□□□□ -0.82
CDC42SE1-203ENST00000470278 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
CDC42SE1-203ENST00000470278 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
CDC42SE1-203ENST00000470278 TRAV8-4A0A0B4J246 113 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 PSCAO43653 123 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 SCO1O75880 301 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 G0S2P27469 103 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 C1orf43Q9BWL3 253 aa9.94□□□□□ -0.82
CDC42SE1-203ENST00000470278 IGKV2D-24A0A075B6R9 120 aa9.93□□□□□ -0.82
CDC42SE1-203ENST00000470278 DGAT2L7PQ6IED9 249 aa9.93□□□□□ -0.82
CDC42SE1-203ENST00000470278 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
CDC42SE1-203ENST00000470278 CYSLTR1Q9Y271 337 aa9.93□□□□□ -0.82
CDC42SE1-203ENST00000470278 PYGO1Q9Y3Y4 419 aa9.93□□□□□ -0.82
CDC42SE1-203ENST00000470278 NPSP0C0P6 89 aa9.92□□□□□ -0.82
CDC42SE1-203ENST00000470278 MRPS36P82909 103 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-203ENST00000470278 C2orf66Q6UXQ4 117 aa9.92□□□□□ -0.82
CDC42SE1-203ENST00000470278 A0A087WTM6 91 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 LRCOL1A6NCL2 159 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 LINC01549A6NIU2 74 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 TRGC2P03986 189 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 KRTAP26-1Q6PEX3 210 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 Q6ZUT4 128 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
CDC42SE1-203ENST00000470278 MAPKAPK5-AS1Q8N8E1 139 aa9.9□□□□□ -0.82
CDC42SE1-203ENST00000470278 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
CDC42SE1-203ENST00000470278 URB1-AS1Q96HZ7 61 aa9.9□□□□□ -0.82
CDC42SE1-203ENST00000470278 DNAH5Q8TE73 4624 aa9.89□□□□□ -0.83
CDC42SE1-203ENST00000470278 CCL25O15444 150 aa9.89□□□□□ -0.83
CDC42SE1-203ENST00000470278 LINC00614P0C842 121 aa9.89□□□□□ -0.83
CDC42SE1-203ENST00000470278 RAB5BP61020 215 aa9.89□□□□□ -0.83
CDC42SE1-203ENST00000470278 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
CDC42SE1-203ENST00000470278 IGLV10-54A0A075B6I4 117 aa9.88□□□□□ -0.83
CDC42SE1-203ENST00000470278 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
CDC42SE1-203ENST00000470278 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
CDC42SE1-203ENST00000470278 EREGO14944 169 aa9.88□□□□□ -0.83
CDC42SE1-203ENST00000470278 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
CDC42SE1-203ENST00000470278 IGLV4-3A0A075B6K6 122 aa9.87□□□□□ -0.83
CDC42SE1-203ENST00000470278 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-203ENST00000470278 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
CDC42SE1-203ENST00000470278 IGKV3OR2-268A0A0C4DH90 116 aa9.86□□□□□ -0.83
CDC42SE1-203ENST00000470278 RNASE13Q5GAN3 156 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-203ENST00000470278 CHCHD1Q96BP2 118 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-203ENST00000470278 A0A096LNJ9 63 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 C1orf196B1AJZ1 125 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 WFDC2Q14508 124 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 SS18Q15532 418 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 PAPPA-AS1Q5QFB9 102 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 Q6ZN92 141 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 ERASQ7Z444 233 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 Q8N814 137 aa9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-203ENST00000470278 HBDP02042 147 aa9.84□□□□□ -0.83
CDC42SE1-203ENST00000470278 BAALCQ8WXS3 180 aa9.84□□□□□ -0.83
CDC42SE1-203ENST00000470278 AMELXQ99217 191 aa9.84□□□□□ -0.83
CDC42SE1-203ENST00000470278 HERC1Q15751 4861 aa9.84□□□□□ -0.83
CDC42SE1-203ENST00000470278 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 GAGE12HA6NDE8 117 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 IFITM10A6NMD0 228 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 FOXI1Q12951 378 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 CDPF1Q6NVV7 123 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 CD164L2Q6UWJ8 174 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 C2orf88Q9BSF0 95 aa9.83□□□□□ -0.84
CDC42SE1-203ENST00000470278 XCL1P47992 114 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 SPATA12Q7Z6I5 190 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 SCGB3A1Q96QR1 104 aa9.82□□□□□ -0.84
CDC42SE1-203ENST00000470278 USP17L23D6RBM5 183 aa9.81□□□□□ -0.84
CDC42SE1-203ENST00000470278 LECT2O14960 151 aa9.81□□□□□ -0.84
CDC42SE1-203ENST00000470278 KRTAP10-2P60368 255 aa9.81□□□□□ -0.84
CDC42SE1-203ENST00000470278 VCX2Q9H322 139 aa9.81□□□□□ -0.84
CDC42SE1-203ENST00000470278 PGPEP1Q9NXJ5 209 aa9.81□□□□□ -0.84
CDC42SE1-203ENST00000470278 UBE2D1P51668 147 aa9.8□□□□□ -0.84
CDC42SE1-203ENST00000470278 PDZD11Q5EBL8 140 aa9.8□□□□□ -0.84
CDC42SE1-203ENST00000470278 FAM19A3Q7Z5A8 133 aa9.8□□□□□ -0.84
CDC42SE1-203ENST00000470278 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-203ENST00000470278 HIST1H2BKO60814 126 aa9.79□□□□□ -0.84
CDC42SE1-203ENST00000470278 HSBP1O75506 76 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms