RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 Q1RN00 199 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 DEFB121Q5J5C9 76 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 UBE2WQ96B02 151 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 SPANXDQ9BXN6 97 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 SPANXCQ9NY87 97 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 PYGO1Q9Y3Y4 419 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 IGHV3-16A0A0C4DH30 117 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 I3L3M4 83 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 TRIAP1O43715 76 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 TRBV12-3P01733 135 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 ELANEP08246 267 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 ID1P41134 155 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
HDAC3-205ENST00000469550 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-205ENST00000469550 C15orf53Q8NAA6 179 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 LITAFQ99732 161 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 RHPN1-AS1Q9BWJ2 59 aa7.04□□□□□ -1.28
HDAC3-205ENST00000469550 ZNF256Q9Y2P7 627 aaPredicted RBP7.04□□□□□ -1.28
HDAC3-205ENST00000469550 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 TEX49A0A1B0GTD5 131 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 H7C2G1 150 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 K7EMT4 169 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 COX6CP09669 75 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 EDA2RQ9HAV5 297 aa7.03□□□□□ -1.28
HDAC3-205ENST00000469550 A0A0J9YXV3 536 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 IGHV3-30-3P0DP02 117 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
HDAC3-205ENST00000469550 C2orf82Q6UX34 121 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-205ENST00000469550 ICOSQ9Y6W8 199 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 H7C423 109 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 ZNF56Q15929 161 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 BEAN1Q3B7T3 259 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 TIMM21Q9BVV7 248 aa7.02□□□□□ -1.29
HDAC3-205ENST00000469550 DAZ1Q9NQZ3 744 aaKnown RBP7.02□□□□□ -1.29
HDAC3-205ENST00000469550 CCDC179H3BU77 68 aa7.01□□□□□ -1.29
HDAC3-205ENST00000469550 FAM74A4Q5TZK3 123 aa7.01□□□□□ -1.29
HDAC3-205ENST00000469550 DCANP1Q8TF63 244 aa7.01□□□□□ -1.29
HDAC3-205ENST00000469550 FAM110AQ9BQ89 295 aa7.01□□□□□ -1.29
HDAC3-205ENST00000469550 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 IGHV1-58A0A0C4DH39 117 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 TIMM17BO60830 172 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 IGHG2P01859 326 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 MIAQ16674 131 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 TMEM219Q86XT9 240 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 DEFB104AQ8WTQ1 72 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 LINC00527Q9UJ94 153 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 TRBV7-7A0A0K0K1E9 115 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 LST1O00453 97 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 RNF152Q8N8N0 203 aa7□□□□□ -1.29
HDAC3-205ENST00000469550 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 H3BUX3 64 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 IGHV1OR15-1A0A075B7D0 117 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 IGLV1-40P01703 118 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 ACYP1P07311 99 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 PRSS2P07478 247 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 Q8N2B8 174 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 FAM104AQ969W3 186 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 SPXQ9BT56 116 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 IMUPQ9GZP8 106 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 NDUFA12Q9UI09 145 aa6.99□□□□□ -1.29
HDAC3-205ENST00000469550 IGKV3-7A0A075B6H7 116 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 ADAMTSL4-AS1Q5T5F5 129 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 TMEM61Q8N0U2 210 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
HDAC3-205ENST00000469550 PF4V1P10720 104 aa6.97□□□□□ -1.29
HDAC3-205ENST00000469550 CD28P10747 220 aa6.97□□□□□ -1.29
HDAC3-205ENST00000469550 TRGV11A0A075B6L2 103 aa6.97□□□□□ -1.29
HDAC3-205ENST00000469550 TMEM126AQ9H061 195 aa6.97□□□□□ -1.29
HDAC3-205ENST00000469550 ZNF702PQ9H963 129 aa6.97□□□□□ -1.29
HDAC3-205ENST00000469550 A6NDX4 124 aa6.96□□□□□ -1.3
HDAC3-205ENST00000469550 LY6EQ16553 131 aa6.96□□□□□ -1.3
HDAC3-205ENST00000469550 TRAV8-3A0A0A6YYJ7 113 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 ADARB2-AS1A8MUL3 147 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 SNRPD3P62318 126 aaKnown RBP6.95□□□□□ -1.3
HDAC3-205ENST00000469550 CFHR3Q02985 330 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 MEIG1Q5JSS6 88 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 PIK3CD-AS1Q5SR53 167 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 DNAH3Q8TD57 4116 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 K7EQG2 157 aa6.95□□□□□ -1.3
HDAC3-205ENST00000469550 CLEC2BQ92478 149 aa6.94□□□□□ -1.3
HDAC3-205ENST00000469550 DUX3Q96PT4 197 aa6.94□□□□□ -1.3
HDAC3-205ENST00000469550 TRAV12-2A0A075B6T6 113 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 NDUFA1O15239 70 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 TIRAPP58753 221 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 SMIM20Q8N5G0 67 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 UBE2D4Q9Y2X8 147 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
HDAC3-205ENST00000469550 C11orf44Q8N8P7 122 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 CHCHD7Q9BUK0 85 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
HDAC3-205ENST00000469550 EDN2P20800 178 aa6.92□□□□□ -1.3
HDAC3-205ENST00000469550 HERV-K104P63124 156 aa6.92□□□□□ -1.3
HDAC3-205ENST00000469550 SPINK13Q1W4C9 94 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms