RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 M0R2P5 195 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 CKS2P33552 79 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 PIK3CD-AS1Q5SR53 167 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 Q6ZSN1 163 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 KLK5Q9Y337 293 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-208ENST00000468300 J3QQQ9 107 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 SNCGO76070 127 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 WFDC2Q14508 124 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 PMCHL1Q16048 86 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 FAM19A2Q8N3H0 131 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 TMEM263Q8WUH6 116 aaKnown RBP5.91□□□□□ -1.46
BRCA1-208ENST00000468300 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
BRCA1-208ENST00000468300 DNHD1Q96M86 4753 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 CFAP126Q5VTH2 177 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 SUMO4Q6EEV6 95 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
BRCA1-208ENST00000468300 NDUFC2O95298 119 aa5.9□□□□□ -1.46
BRCA1-208ENST00000468300 IGHV1-24A0A0C4DH33 117 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 H7C1H1 209 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 M0QY20 66 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 DAZ2Q13117 558 aaKnown RBP5.9□□□□□ -1.47
BRCA1-208ENST00000468300 SLC25A34Q6PIV7 304 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 RAB37Q96AX2 223 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 OVOL2Q9BRP0 275 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 SPANXCQ9NY87 97 aa5.9□□□□□ -1.47
BRCA1-208ENST00000468300 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 LOC389332A0A1B0GUA5 103 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 CHCHD1Q96BP2 118 aaKnown RBP5.89□□□□□ -1.47
BRCA1-208ENST00000468300 AP5S1Q9NUS5 200 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 APOC4P55056 127 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 Q6ZTI0 123 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 APOMO95445 188 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 Q8N976 141 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 C16orf74Q96GX8 76 aa5.89□□□□□ -1.47
BRCA1-208ENST00000468300 F8W1H4 67 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 MGPP08493 103 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 LINC00173Q6ZV60 143 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 A0A1W2PPM0 123 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 FAM74A4Q5TZK3 123 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 GAGE2AQ6NT46 116 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 SPATA12Q7Z6I5 190 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 LINC00612Q8N6U2 182 aa5.88□□□□□ -1.47
BRCA1-208ENST00000468300 NOP10Q9NPE3 64 aaKnown RBP5.88□□□□□ -1.47
BRCA1-208ENST00000468300 HUWE1Q7Z6Z7 4374 aaKnown RBP5.87□□□□□ -1.47
BRCA1-208ENST00000468300 IGHV3-73A0A0B4J1V6 119 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 H3BRM9 83 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 P0DMU3 169 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 FAM231AP0DMU4 169 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 FAM231CP0DMU5 169 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 POLR2KP53803 58 aaKnown RBP5.87□□□□□ -1.47
BRCA1-208ENST00000468300 DEFB135Q30KP9 77 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 LGALS9BQ3B8N2 356 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 KPRPQ5T749 579 aaPredicted RBP5.87□□□□□ -1.47
BRCA1-208ENST00000468300 Q8N8P6 123 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 NBEAL1Q6ZS30 2694 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 A0A1B0GWB2 263 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 A8MWV9 139 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 SEC11AP67812 179 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 ANKRD29Q8N6D5 301 aa5.87□□□□□ -1.47
BRCA1-208ENST00000468300 TRBV6-5A0A0K0K1A5 114 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
BRCA1-208ENST00000468300 RRN3P1Q2M238 152 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 Q8NAQ8 132 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 TRGV1A0A0A0MS02 117 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 DPM2O94777 84 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 SMIM2Q9BVW6 85 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 ZFP2Q6ZN57 461 aa5.86□□□□□ -1.47
BRCA1-208ENST00000468300 FOXI1Q12951 378 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 ZNF56Q15929 161 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 ZC2HC1BQ5TFG8 222 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 TMEM70Q9BUB7 260 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
BRCA1-208ENST00000468300 IGHV3-53P01767 116 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
BRCA1-208ENST00000468300 TRAV4A0A0B4J268 109 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 TRBV27A0A0K0K1C4 114 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 C3orf79P0CE67 100 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 TRAV9-2A0A087WT02 112 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 IGHV4-28A0A0C4DH34 117 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 F5H697 171 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 PRB2P02812 416 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-208ENST00000468300 SRSF9Q13242 221 aaKnown RBP eCLIP5.84□□□□□ -1.47
BRCA1-208ENST00000468300 NEXN-AS1Q8NBZ9 246 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 DPH3Q96FX2 82 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 TENM3Q9P273 2699 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 COL7A1Q02388 2944 aa5.84□□□□□ -1.47
BRCA1-208ENST00000468300 DEFB4AO15263 64 aa5.84□□□□□ -1.48
BRCA1-208ENST00000468300 DEFB104AQ8WTQ1 72 aa5.84□□□□□ -1.48
BRCA1-208ENST00000468300 CHCHD5Q9BSY4 110 aa5.84□□□□□ -1.48
BRCA1-208ENST00000468300 TMEM262E9PQX1 116 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 K7EIL1 84 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 NMUP48645 174 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 CELA1Q9UNI1 258 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 DNAH9Q9NYC9 4486 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 SDHAF1A6NFY7 115 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 TSHBP01222 138 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 FCER1GP30273 86 aa5.83□□□□□ -1.48
BRCA1-208ENST00000468300 FHL2Q14192 279 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms