RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, human

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCCAG3-208	ENST00000466579	CSDC2	Q9Y534	153 aa	Known RBP	6.23	□□□□□ -1.41
SDCCAG3-208	ENST00000466579	FUS	P35637	526 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
SDCCAG3-208	ENST00000466579	TMEM136	Q6ZRR5	245 aa		6.22	□□□□□ -1.41
SDCCAG3-208	ENST00000466579	KIR2DL4	Q99706	377 aa		6.22	□□□□□ -1.41
SDCCAG3-208	ENST00000466579	FCER1G	P30273	86 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	KRTAP10-1	P60331	282 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	C4orf48	Q5BLP8	95 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	AMMECR1L	Q6DCA0	310 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CLPSL2	Q6UWE3	100 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	PRELID3A	Q96N28	172 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	TIMM21	Q9BVV7	248 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CDC42SE2	Q9NRR3	84 aa		6.21	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	IGLV5-52	A0A0A0MRZ9	124 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	LECT2	O14960	151 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	GCSH	P23434	173 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	SMAGP	Q0VAQ4	97 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	C14orf177	Q52M58	125 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	RNASEK	Q6P5S7	137 aa	Known RBP	6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	OR5A1	Q8NGJ0	315 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	KRTAP4-8	Q9BYQ9	185 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	UBE2D4	Q9Y2X8	147 aa		6.2	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	USP17L23	D6RBM5	183 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	HLA-DQA1	P01909	254 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	S100P	P25815	95 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	COX19	Q49B96	90 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	ZNF664	Q8N3J9	261 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	FAM104A	Q969W3	186 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	TMEM101	Q96IK0	257 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	GNB1L	Q9BYB4	327 aa		6.19	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	IGLV10-54	A0A075B6I4	117 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	LINC00959	A0A1B0GUT2	108 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579		K7EMI3	77 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	SVBP	Q8N300	66 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579		Q8N8P6	123 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	TMEM18	Q96B42	140 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	MAP1LC3A	Q9H492	121 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	RPS10P5	Q9NQ39	176 aa		6.18	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CCL25	O15444	150 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	SNAPIN	O95295	136 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	APOC3	P02656	99 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	PRSS1	P07477	247 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	XG	P55808	180 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	MRPS36	P82909	103 aa	Known RBP	6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	FOXI1	Q12951	378 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	NDUFA5	Q16718	116 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	DGAT2L7P	Q6IED9	249 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579		Q6ZSA8	131 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	KRTAP17-1	Q9BYP8	105 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	SPANXA1	Q9NS26	97 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	PYGO1	Q9Y3Y4	419 aa		6.17	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	6.16	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	GAGE12H	A6NDE8	117 aa		6.16	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	MT-ND6	P03923	174 aa		6.16	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CNBP	P62633	177 aa	Known RBP	6.16	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	RPL39	P62891	51 aa	Known RBP	6.16	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	LINC01546	A6NGU7	62 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	RAB5A	P20339	215 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	CD164L2	Q6UWJ8	174 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579		Q6ZUT4	128 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	C15orf56	Q8N910	161 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	YPEL4	Q96NS1	127 aa		6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	NXT2	Q9NPJ8	142 aa	Known RBP	6.15	□□□□□ -1.42
SDCCAG3-208	ENST00000466579	PCLO	Q9Y6V0	5065 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	VPS13B	Q7Z7G8	4022 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	ABCA13	Q86UQ4	5058 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	IGKV3OR2-268	A0A0C4DH90	116 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	LOC389332	A0A1B0GUA5	103 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	C1orf196	B1AJZ1	125 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	NPS	P0C0P6	89 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	SS18	Q15532	418 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	KIAA1644	Q3SXP7	199 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	ORMDL2	Q53FV1	153 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	CFAP161	Q6P656	301 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	C9orf163	Q8N9P6	203 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	FAM30A	Q9NZY2	134 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	FAT1	Q14517	4588 aa		6.14	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	GVQW2	A0A096LPI5	108 aa	Predicted RBP	6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	SLPI	P03973	132 aa		6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	IFI27	P40305	119 aa	Predicted RBP	6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	XCL1	P47992	114 aa		6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579		Q8N1X5	172 aa		6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	MRPL18	Q9H0U6	180 aa	Known RBP	6.13	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	IGLV4-3	A0A075B6K6	122 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	IGHV1-58	A0A0C4DH39	117 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	hDV102S1	A0JD36	115 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	IGIP	A6NJ69	53 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	RNASE13	Q5GAN3	156 aa	Known RBP	6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	C2orf66	Q6UXQ4	117 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	OPRPN	Q99935	248 aa	Predicted RBP	6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	CYSLTR1	Q9Y271	337 aa		6.12	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	G0S2	P27469	103 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	FABP9	Q0Z7S8	132 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	LINC01620	Q4KN68	170 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	SDIM1	Q6ZPB5	146 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	SLC7A5P1	Q8MH63	180 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	AMELX	Q99217	191 aa		6.11	□□□□□ -1.43
SDCCAG3-208	ENST00000466579	TRAV13-1	A0A0B4J241	112 aa		6.1	□□□□□ -1.43

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