RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 M0R135 149 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 TNFP01375 233 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 S100A3P33764 101 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 SPAG11BQ08648 103 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 CATR1Q13166 79 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 SPAG11AQ6PDA7 123 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 C5orf38Q86SI9 138 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 C8orf59Q8N0T1 100 aaPredicted RBP0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 NDUFA4L2Q9NRX3 87 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 V9GYH0 126 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 VWFP04275 2813 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 PKD1L1Q8TDX9 2849 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 NSD1Q96L73 2696 aaPredicted RBP0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 BIVM-ERCC5R4GMW8 1640 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 PTPN13Q12923 2485 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 CUL7Q14999 1698 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 RIMS1Q86UR5 1692 aaKnown RBP0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 ROBO1Q9Y6N7 1651 aa0.05□□□□□ -2.4
TM9SF3-203ENST00000464654 LRRC37A2A6NM11 1700 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 FLNCQ14315 2725 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 ZNF236Q9UL36 1845 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 TENM4Q6N022 2769 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 HMCN2Q8NDA2 5059 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 A0A1B0GV90 55 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 M0R3E3 92 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 AKAIN1P0CW23 69 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 HAMPP81172 84 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 COMMD6Q7Z4G1 85 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 LINC00472Q9H8W2 130 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 SPCS1Q9Y6A9 102 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 DOPEY2Q9Y3R5 2298 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 HSPG2P98160 4391 aa0.04□□□□□ -2.4
TM9SF3-203ENST00000464654 PKDREJQ9NTG1 2253 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 MYOM1P52179 1685 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 TRBV7-3A0A075B6L6 115 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 OOSP1A8MZH6 123 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 C10orf142B7Z368 130 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 SSSCA1O60232 199 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 IFNGP01579 166 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 COX17Q14061 63 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 TMEM170BQ5T4T1 132 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 C2orf88Q9BSF0 95 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 IER3IP1Q9Y5U9 82 aa0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 GOLGA4Q13439 2230 aaKnown RBP0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 KTN1Q86UP2 1357 aaKnown RBP0.03□□□□□ -2.4
TM9SF3-203ENST00000464654 MYOM2P54296 1465 aa0.03□□□□□ -2.41
TM9SF3-203ENST00000464654 LRP2P98164 4655 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 TNXBP22105 4242 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 MYO7BQ6PIF6 2116 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 PSME4Q14997 1843 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 F8VRH5 84 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 BCE1O60756 84 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 APOC3P02656 99 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 WFDC2Q14508 124 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 BAGE2Q86Y30 109 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 Q8IZM0 81 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 MGST2Q99735 147 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 DYNLRB1Q9NP97 96 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 SMG6Q86US8 1419 aaKnown RBP0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 LRP6O75581 1613 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 KIF21AQ7Z4S6 1674 aa0.02□□□□□ -2.41
TM9SF3-203ENST00000464654 SBF2Q86WG5 1849 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 USF3Q68DE3 2245 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 UQCR11O14957 56 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 SNAPC5O75971 98 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 TPPP2P59282 170 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 DEFB109BQ30KR1 87 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 MYOZ3Q8TDC0 251 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 TSLPQ969D9 159 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 LINC00474Q9P2X8 69 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 NCOA3Q9Y6Q9 1424 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 WDR7Q9Y4E6 1490 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 EIF4G3O43432 1585 aaKnown RBP0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 ARHGEF5Q12774 1597 aa0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 ATRQ13535 2644 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 MUC12Q9UKN1 5478 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 LOC285095A0A1B0GVY8 99 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 IGLC7A0M8Q6 106 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 LINC00587B1AMM8 73 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 CORTO00230 105 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 HMGN4O00479 90 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 DCDP81605 110 aaKnown RBP0□□□□□ -2.41
TM9SF3-203ENST00000464654 Q6JHZ5 121 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 MRPL54Q6P161 138 aaKnown RBP0□□□□□ -2.41
TM9SF3-203ENST00000464654 C10orf71Q711Q0 1435 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 TP53AIP1Q9HCN2 124 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 LINC01558Q9Y6Z2 57 aa0□□□□□ -2.41
TM9SF3-203ENST00000464654 NHSL1Q5SYE7 1610 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 ERCC6L2Q5T890 1561 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 TRBV6-1A0A0K0K1D8 114 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 UBE2L5PA0A1B0GUS4 154 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 FAM24AA6NFZ4 105 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 CHKB-CPT1BH3BT56 60 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 I3L2K1 104 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 SFT2D2O95562 160 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 GNG4P50150 75 aa-0.01□□□□□ -2.41
TM9SF3-203ENST00000464654 ATP5EP56381 51 aaPredicted RBP-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms