RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TIMM17AQ99595 171 aa10.36□□□□□ -0.75
HDAC6-213ENST00000462730 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 GEMIN7Q9H840 131 aaKnown RBP10.35□□□□□ -0.75
HDAC6-213ENST00000462730 GAGE7O76087 117 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 GAGE12FP0CL80 117 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 GAGE12GP0CL81 117 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 GAGE12IP0CL82 117 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 C20orf203Q8NBC4 194 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
HDAC6-213ENST00000462730 COL6A5A8TX70 2615 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 H3BMG7 143 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 WFDC2Q14508 124 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 PRO0461Q9UI25 63 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 ANK2Q01484 3957 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
HDAC6-213ENST00000462730 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
HDAC6-213ENST00000462730 K7EQD1 137 aa10.33□□□□□ -0.76
HDAC6-213ENST00000462730 EMP1P54849 157 aa10.33□□□□□ -0.76
HDAC6-213ENST00000462730 PRADC1Q9BSG0 188 aa10.33□□□□□ -0.76
HDAC6-213ENST00000462730 PMVKQ15126 192 aa10.32□□□□□ -0.76
HDAC6-213ENST00000462730 KRTAP10-11P60412 298 aa10.32□□□□□ -0.76
HDAC6-213ENST00000462730 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
HDAC6-213ENST00000462730 APOC4P55056 127 aa10.31□□□□□ -0.76
HDAC6-213ENST00000462730 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
HDAC6-213ENST00000462730 ZNRF2Q8NHG8 242 aa10.31□□□□□ -0.76
HDAC6-213ENST00000462730 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
HDAC6-213ENST00000462730 OPRPNQ99935 248 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-213ENST00000462730 ZNF815PA8K554 130 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 EGFEM1PQ0D2K5 195 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 X6R8D5 127 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 RPL36AP83881 106 aaKnown RBP10.3□□□□□ -0.76
HDAC6-213ENST00000462730 DEFB135Q30KP9 77 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 ETDBQ3ZM63 59 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
HDAC6-213ENST00000462730 RPL36ALQ969Q0 106 aaKnown RBP10.3□□□□□ -0.76
HDAC6-213ENST00000462730 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
HDAC6-213ENST00000462730 APOMO95445 188 aa10.29□□□□□ -0.76
HDAC6-213ENST00000462730 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
HDAC6-213ENST00000462730 SH2D6Q7Z4S9 175 aa10.29□□□□□ -0.76
HDAC6-213ENST00000462730 PKD1L1Q8TDX9 2849 aa10.29□□□□□ -0.76
HDAC6-213ENST00000462730 IGLV4-3A0A075B6K6 122 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 TRBV20-1A0A075B6N2 111 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 M0QXV9 152 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-213ENST00000462730 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-213ENST00000462730 GAGE12JA6NER3 117 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 C11orf86A6NJI1 115 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 FOXI1Q12951 378 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 GAGE4Q13068 117 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 GAGE5Q13069 117 aa10.28□□□□□ -0.76
HDAC6-213ENST00000462730 PYGO1Q9Y3Y4 419 aa10.27□□□□□ -0.77
HDAC6-213ENST00000462730 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 UBE2D1P51668 147 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 UBE2D3P61077 147 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 UBE2D2P62837 147 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 SRSF9Q13242 221 aaKnown RBP eCLIP10.26□□□□□ -0.77
HDAC6-213ENST00000462730 CEMP1Q6PRD7 247 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-213ENST00000462730 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 HERVK_113P61574 105 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 SPANXA1Q9NS26 97 aa10.26□□□□□ -0.77
HDAC6-213ENST00000462730 DNAH3Q8TD57 4116 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 TRBV6-4A0A1B0GX49 114 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 FHL2Q14192 279 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 DAZ4Q86SG3 579 aaKnown RBP10.25□□□□□ -0.77
HDAC6-213ENST00000462730 LINC00612Q8N6U2 182 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 DAZ3Q9NR90 486 aaKnown RBP10.25□□□□□ -0.77
HDAC6-213ENST00000462730 ERG28Q9UKR5 140 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 LOC100131303A0A0U1RQF7 123 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
HDAC6-213ENST00000462730 FAM104AQ969W3 186 aa10.24□□□□□ -0.77
HDAC6-213ENST00000462730 MDFIQ99750 246 aa10.24□□□□□ -0.77
HDAC6-213ENST00000462730 A0A0J9YY99 117 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 GAGE6Q13070 117 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 SBSPONQ8IVN8 264 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 RNASE13Q5GAN3 156 aaKnown RBP10.23□□□□□ -0.77
HDAC6-213ENST00000462730 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 TEN1Q86WV5 123 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 AMELXQ99217 191 aa10.23□□□□□ -0.77
HDAC6-213ENST00000462730 IGHV4-28A0A0C4DH34 117 aa10.22□□□□□ -0.77
HDAC6-213ENST00000462730 HERV-K104P63124 156 aa10.22□□□□□ -0.77
HDAC6-213ENST00000462730 FAM222AQ5U5X8 452 aa10.22□□□□□ -0.77
HDAC6-213ENST00000462730 Q6ZUT4 128 aa10.22□□□□□ -0.77
HDAC6-213ENST00000462730 A0A0J9YXV3 536 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 LYRM9A8MSI8 78 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 DEFB4AO15263 64 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 NTM-AS1Q6ZSK4 140 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 NBEAL2Q6ZNJ1 2754 aa10.21□□□□□ -0.77
HDAC6-213ENST00000462730 LOC107984156A0A0G2JMH3 177 aa10.21□□□□□ -0.78
HDAC6-213ENST00000462730 A8MZ25 164 aa10.21□□□□□ -0.78
HDAC6-213ENST00000462730 ARL17AQ8IVW1 177 aa10.21□□□□□ -0.78
HDAC6-213ENST00000462730 RNF183Q96D59 192 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms