RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 C11orf72Q8NBR9 251 aa8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 IGHV3OR16-12A0A075B7B8 117 aa8.46□□□□□ -1.06
PDZRN3-203ENST00000462146 LINC00694P0DN24 101 aa8.46□□□□□ -1.06
PDZRN3-203ENST00000462146 LINC01587Q99440 93 aa8.46□□□□□ -1.06
PDZRN3-203ENST00000462146 Q9H8V8 135 aa8.46□□□□□ -1.06
PDZRN3-203ENST00000462146 ZNF702PQ9H963 129 aa8.46□□□□□ -1.06
PDZRN3-203ENST00000462146 NDUFA1O15239 70 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 SOSTDC1Q6X4U4 206 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 Q8N2B8 174 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 YAE1D1Q9NRH1 226 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 FBN2P35556 2912 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 FAM208BQ5VWN6 2430 aa8.45□□□□□ -1.06
PDZRN3-203ENST00000462146 Q6Q795 121 aa8.44□□□□□ -1.06
PDZRN3-203ENST00000462146 UBE2E2Q96LR5 201 aa8.44□□□□□ -1.06
PDZRN3-203ENST00000462146 WNK1Q9H4A3 2382 aa8.44□□□□□ -1.06
PDZRN3-203ENST00000462146 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE7O76087 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE12FP0CL80 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE12GP0CL81 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE12IP0CL82 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 GAGE4Q13068 117 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 LINC00242Q5T6M2 205 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 MAP6D1Q9H9H5 199 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 NBPF19A0A087WUL8 3843 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 CENPEQ02224 2701 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 A8MTW9 85 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 TIMM17BO60830 172 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 CHD6Q8TD26 2715 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 VPREB3Q9UKI3 123 aa8.43□□□□□ -1.06
PDZRN3-203ENST00000462146 TIRAPP58753 221 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 NOTCH3Q9UM47 2321 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 DOPEY1Q5JWR5 2465 aa8.42□□□□□ -1.06
PDZRN3-203ENST00000462146 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 RS1O15537 224 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 KHDC1LQ5JSQ8 128 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 LINC01356Q8N9X3 169 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 MYO9AB2RTY4 2548 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 C2CD3Q4AC94 2353 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 TEX15Q9BXT5 2789 aa8.41□□□□□ -1.06
PDZRN3-203ENST00000462146 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 CR1P17927 2039 aa8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 BEAN1Q3B7T3 259 aa8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 SMCR5Q8TEV8 140 aa8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 DNAJC30Q96LL9 226 aa8.4□□□□□ -1.06
PDZRN3-203ENST00000462146 COX7A2LO14548 114 aa8.4□□□□□ -1.07
PDZRN3-203ENST00000462146 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.07
PDZRN3-203ENST00000462146 PIK3CD-AS1Q5SR53 167 aa8.4□□□□□ -1.07
PDZRN3-203ENST00000462146 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.07
PDZRN3-203ENST00000462146 FAM218AQ96MZ4 157 aa8.4□□□□□ -1.07
PDZRN3-203ENST00000462146 A0A096LNT2 108 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 HERVK_113P63121 156 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 INSP01308 110 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 PRIMA1Q86XR5 153 aa8.39□□□□□ -1.07
PDZRN3-203ENST00000462146 Q6YL49 198 aa8.38□□□□□ -1.07
PDZRN3-203ENST00000462146 DYNLRB2Q8TF09 96 aa8.38□□□□□ -1.07
PDZRN3-203ENST00000462146 DAZ2Q13117 558 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 SHISA2Q6UWI4 295 aa8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 DAZ4Q86SG3 579 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 Q96MF0 132 aa8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 DAZ3Q9NR90 486 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
PDZRN3-203ENST00000462146 F5H768 121 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 Q6ZTI0 123 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 C1orf158Q8N1D5 194 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 TRBV7-7A0A0K0K1E9 115 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 MYO18BQ8IUG5 2567 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 NIPBLQ6KC79 2804 aaeCLIP8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 DEFB114Q30KQ6 69 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 Q9HAA7 133 aa8.36□□□□□ -1.07
PDZRN3-203ENST00000462146 PEMTQ9UBM1 199 aa8.35□□□□□ -1.07
PDZRN3-203ENST00000462146 SMIM20Q8N5G0 67 aa8.35□□□□□ -1.07
PDZRN3-203ENST00000462146 K7EQD1 137 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 TLN2Q9Y4G6 2542 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 JMJD1CQ15652 2540 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 BAALC-AS2P0C853 105 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 C11orf44Q8N8P7 122 aa8.34□□□□□ -1.07
PDZRN3-203ENST00000462146 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.08
PDZRN3-203ENST00000462146 LOC100131303A0A0U1RQF7 123 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 IL17DQ8TAD2 202 aa8.33□□□□□ -1.08
PDZRN3-203ENST00000462146 NF1P21359 2839 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms