RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.27
UBR4-208ENST00000459947 LINC00269Q8N2A0 174 aa7.15□□□□□ -1.27
UBR4-208ENST00000459947 SS18Q15532 418 aa7.14□□□□□ -1.27
UBR4-208ENST00000459947 VPS25Q9BRG1 176 aa7.14□□□□□ -1.27
UBR4-208ENST00000459947 ENHOQ6UWT2 76 aa7.14□□□□□ -1.27
UBR4-208ENST00000459947 LYSTQ99698 3801 aa7.14□□□□□ -1.27
UBR4-208ENST00000459947 MRPS36P82909 103 aaKnown RBP7.14□□□□□ -1.27
UBR4-208ENST00000459947 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.13□□□□□ -1.27
UBR4-208ENST00000459947 IGKV2-29A2NJV5 120 aaPredicted RBP7.13□□□□□ -1.27
UBR4-208ENST00000459947 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
UBR4-208ENST00000459947 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
UBR4-208ENST00000459947 SPATA12Q7Z6I5 190 aa7.13□□□□□ -1.27
UBR4-208ENST00000459947 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
UBR4-208ENST00000459947 CYSLTR1Q9Y271 337 aa7.13□□□□□ -1.27
UBR4-208ENST00000459947 GAS8-AS1O95177 125 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 RAB5BP61020 215 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 FABP9Q0Z7S8 132 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
UBR4-208ENST00000459947 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 C16orf90A8MZG2 172 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 S100A2P29034 98 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 Q8N3U1 123 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 Q8N814 137 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 TRAPPC1Q9Y5R8 145 aa7.12□□□□□ -1.27
UBR4-208ENST00000459947 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 UBE2D4Q9Y2X8 147 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 KMT2CQ8NEZ4 4911 aaKnown RBP7.11□□□□□ -1.27
UBR4-208ENST00000459947 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 CDC42SE2Q9NRR3 84 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 Q6ZN92 141 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 LINC00518Q8N0U6 118 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 AP5S1Q9NUS5 200 aa7.11□□□□□ -1.27
UBR4-208ENST00000459947 FA2HQ7L5A8 372 aa7.1□□□□□ -1.27
UBR4-208ENST00000459947 C1orf196B1AJZ1 125 aa7.1□□□□□ -1.27
UBR4-208ENST00000459947 IGLV5-52A0A0A0MRZ9 124 aa7.1□□□□□ -1.27
UBR4-208ENST00000459947 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
UBR4-208ENST00000459947 C2orf88Q9BSF0 95 aa7.09□□□□□ -1.27
UBR4-208ENST00000459947 CHCHD10Q8WYQ3 142 aaPredicted RBP7.09□□□□□ -1.27
UBR4-208ENST00000459947 LOC389332A0A1B0GUA5 103 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 LINC01546A6NGU7 62 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 TMEM141Q96I45 108 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 LINC00959A0A1B0GUT2 108 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 F8WDY8 70 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 APOMO95445 188 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 SEC11AP67812 179 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 CLPSL2Q6UWE3 100 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 CD164L2Q6UWJ8 174 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 BAALCQ8WXS3 180 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 TGIF2-C20orf24A0A0A6YYL0 155 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 GCSHP23434 173 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
UBR4-208ENST00000459947 GAGE12HA6NDE8 117 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 USP17L23D6RBM5 183 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 C2orf66Q6UXQ4 117 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 DNAH17Q9UFH2 4485 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
UBR4-208ENST00000459947 DNAH10Q8IVF4 4471 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
UBR4-208ENST00000459947 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 TEX43Q6ZNM6 134 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 LINC01561Q8N1V8 128 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 IFITM10A6NMD0 228 aa7.06□□□□□ -1.28
UBR4-208ENST00000459947 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 Q6ZUT4 128 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 YPEL4Q96NS1 127 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 BATFQ16520 125 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 DEFB104AQ8WTQ1 72 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 TOMM6Q96B49 74 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 IGLV10-54A0A075B6I4 117 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 A0A1B0GV90 55 aa7.05□□□□□ -1.28
UBR4-208ENST00000459947 COX7A2LO14548 114 aa7.04□□□□□ -1.28
UBR4-208ENST00000459947 SVIPQ8NHG7 77 aa7.04□□□□□ -1.28
UBR4-208ENST00000459947 VCX2Q9H322 139 aa7.04□□□□□ -1.28
UBR4-208ENST00000459947 ERASQ7Z444 233 aa7.04□□□□□ -1.28
UBR4-208ENST00000459947 GVQW2A0A096LPI5 108 aaPredicted RBP7.04□□□□□ -1.28
UBR4-208ENST00000459947 CNBPP62633 177 aaKnown RBP7.04□□□□□ -1.28
UBR4-208ENST00000459947 RPL39P62891 51 aaKnown RBP7.04□□□□□ -1.28
UBR4-208ENST00000459947 CHCHD1Q96BP2 118 aaKnown RBP7.04□□□□□ -1.28
UBR4-208ENST00000459947 MALP21145 153 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 KRTAP10-2P60368 255 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 FOXI1Q12951 378 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 SCGB3A1Q96QR1 104 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 RYR3Q15413 4870 aa7.03□□□□□ -1.28
UBR4-208ENST00000459947 ATP5LO75964 103 aa7.02□□□□□ -1.28
UBR4-208ENST00000459947 XCL1P47992 114 aa7.02□□□□□ -1.28
UBR4-208ENST00000459947 OR10D4PQ8NGN7 298 aa7.02□□□□□ -1.28
UBR4-208ENST00000459947 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
UBR4-208ENST00000459947 hDV102S1A0JD36 115 aa7.02□□□□□ -1.29
UBR4-208ENST00000459947 LINC00614P0C842 121 aa7.02□□□□□ -1.29
UBR4-208ENST00000459947 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
UBR4-208ENST00000459947 AMELXQ99217 191 aa7.02□□□□□ -1.29
UBR4-208ENST00000459947 HBDP02042 147 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms