RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 PPBPP02775 128 aa11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 PLA2G1BP04054 148 aaKnown RBP11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 CLLU1Q5K131 121 aa11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 NRACQ8N912 160 aa11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 ANAPC16Q96DE5 110 aa11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 CHAC1Q9BUX1 264 aa11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 DMBT1Q9UGM3 2413 aaPredicted RBP11.39□□□□□ -0.59
SCARNA2-201ENST00000458748 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
SCARNA2-201ENST00000458748 CNBPP62633 177 aaKnown RBP11.38□□□□□ -0.59
SCARNA2-201ENST00000458748 C9orf163Q8N9P6 203 aa11.38□□□□□ -0.59
SCARNA2-201ENST00000458748 CHCHD10Q8WYQ3 142 aaPredicted RBP11.38□□□□□ -0.59
SCARNA2-201ENST00000458748 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
SCARNA2-201ENST00000458748 RPL32P62910 135 aaKnown RBP11.37□□□□□ -0.59
SCARNA2-201ENST00000458748 SS18Q15532 418 aa11.37□□□□□ -0.59
SCARNA2-201ENST00000458748 A0A1B0GXF2 115 aa11.36□□□□□ -0.59
SCARNA2-201ENST00000458748 PHOX2AO14813 284 aa11.36□□□□□ -0.59
SCARNA2-201ENST00000458748 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
SCARNA2-201ENST00000458748 CSDC2Q9Y534 153 aaKnown RBP11.36□□□□□ -0.59
SCARNA2-201ENST00000458748 D6R8Y8 96 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 CCL25O15444 150 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 TNFRSF6BO95407 300 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 UQCC3Q6UW78 93 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
SCARNA2-201ENST00000458748 HERC1Q15751 4861 aa11.34□□□□□ -0.59
SCARNA2-201ENST00000458748 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
SCARNA2-201ENST00000458748 ORMDL3Q8N138 153 aa11.34□□□□□ -0.59
SCARNA2-201ENST00000458748 LINC00528Q8N1L1 170 aa11.34□□□□□ -0.59
SCARNA2-201ENST00000458748 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
SCARNA2-201ENST00000458748 XCL1P47992 114 aa11.33□□□□□ -0.6
SCARNA2-201ENST00000458748 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
SCARNA2-201ENST00000458748 CIRBP-AS1Q8TBR5 109 aa11.32□□□□□ -0.6
SCARNA2-201ENST00000458748 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
SCARNA2-201ENST00000458748 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
SCARNA2-201ENST00000458748 C1orf196B1AJZ1 125 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 RAB5AP20339 215 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 IFITM2Q01629 132 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 TMEM136Q6ZRR5 245 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 C15orf56Q8N910 161 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 UBE2D4Q9Y2X8 147 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 DNAH8Q96JB1 4490 aa11.31□□□□□ -0.6
SCARNA2-201ENST00000458748 FOXI1Q12951 378 aa11.3□□□□□ -0.6
SCARNA2-201ENST00000458748 CD164L2Q6UWJ8 174 aa11.3□□□□□ -0.6
SCARNA2-201ENST00000458748 LAMTOR2Q9Y2Q5 125 aa11.3□□□□□ -0.6
SCARNA2-201ENST00000458748 GVQW2A0A096LPI5 108 aaPredicted RBP11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 IGHV1-58A0A0C4DH39 117 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 NPYP01303 97 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 SDIM1Q6ZPB5 146 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 IMMP2LQ96T52 175 aa11.29□□□□□ -0.6
SCARNA2-201ENST00000458748 HIGD2BQ4VC39 106 aa11.28□□□□□ -0.6
SCARNA2-201ENST00000458748 SPANXA1Q9NS26 97 aa11.28□□□□□ -0.6
SCARNA2-201ENST00000458748 MALP21145 153 aa11.27□□□□□ -0.61
SCARNA2-201ENST00000458748 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
SCARNA2-201ENST00000458748 TMEM218A2RU14 115 aa11.26□□□□□ -0.61
SCARNA2-201ENST00000458748 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
SCARNA2-201ENST00000458748 MAP1LC3AQ9H492 121 aa11.26□□□□□ -0.61
SCARNA2-201ENST00000458748 MYCBP2O75592 4640 aa11.26□□□□□ -0.61
SCARNA2-201ENST00000458748 TRAV13-1A0A0B4J241 112 aa11.25□□□□□ -0.61
SCARNA2-201ENST00000458748 COX7A2LO14548 114 aa11.25□□□□□ -0.61
SCARNA2-201ENST00000458748 APOMO95445 188 aa11.24□□□□□ -0.61
SCARNA2-201ENST00000458748 SLPIP03973 132 aa11.24□□□□□ -0.61
SCARNA2-201ENST00000458748 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
SCARNA2-201ENST00000458748 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.24□□□□□ -0.61
SCARNA2-201ENST00000458748 TRAV9-1A0A075B6T8 112 aa11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 PRSS47A8MTI9 375 aa11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 S100PP25815 95 aa11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 IFI27P40305 119 aaPredicted RBP11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 Q6ZUT4 128 aa11.23□□□□□ -0.61
SCARNA2-201ENST00000458748 ADCYAP1P18509 176 aa11.22□□□□□ -0.61
SCARNA2-201ENST00000458748 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
SCARNA2-201ENST00000458748 CIRBPQ14011 172 aaKnown RBP11.22□□□□□ -0.61
SCARNA2-201ENST00000458748 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
SCARNA2-201ENST00000458748 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
SCARNA2-201ENST00000458748 K7EMI3 77 aa11.21□□□□□ -0.61
SCARNA2-201ENST00000458748 CARD19Q96LW7 228 aa11.21□□□□□ -0.61
SCARNA2-201ENST00000458748 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
SCARNA2-201ENST00000458748 G0S2P27469 103 aa11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 COX6A2Q02221 97 aa11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 ORMDL2Q53FV1 153 aa11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 COMMD7Q86VX2 200 aa11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 Q8N8P6 123 aa11.2□□□□□ -0.62
SCARNA2-201ENST00000458748 IFITM10A6NMD0 228 aa11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 J3QL48 77 aa11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 SYCNQ0VAF6 134 aa11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 NXT2Q9NPJ8 142 aaKnown RBP11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 PYGO1Q9Y3Y4 419 aa11.19□□□□□ -0.62
SCARNA2-201ENST00000458748 KRTAP10-4P60372 401 aaPredicted RBP11.18□□□□□ -0.62
SCARNA2-201ENST00000458748 A0A087WYN8 130 aa11.17□□□□□ -0.62
SCARNA2-201ENST00000458748 COX19Q49B96 90 aa11.17□□□□□ -0.62
SCARNA2-201ENST00000458748 Q6ZN92 141 aa11.17□□□□□ -0.62
SCARNA2-201ENST00000458748 CYSLTR1Q9Y271 337 aa11.17□□□□□ -0.62
SCARNA2-201ENST00000458748 TGIF2-C20orf24A0A0A6YYL0 155 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms