RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TIMM8BQ9Y5J9 83 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P4-201ENST00000455362 SMIM26A0A096LP01 95 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 TSTD3H0UI37 97 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 M0R143 59 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 M0R381 172 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 NDUFS5O43920 106 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRGC1P0CF51 173 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 EVI2AP22794 236 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 SMAGPQ0VAQ4 97 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 KRTAP21-3Q3LHN1 58 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 KPRPQ5T749 579 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 FAM104BQ5XKR9 115 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 TMEM191AQ9H0A3 160 aa3.63□□□□□ -1.83
HMGB1P4-201ENST00000455362 COL7A1Q02388 2944 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 M0R2P5 195 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BKO60814 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BJP06899 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BOP23527 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BBP33778 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BDP58876 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 LINC00315P59091 139 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BCP62807 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST2H2BEQ16778 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 TMEM263Q8WUH6 116 aaKnown RBP3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BHQ93079 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 VSIG2Q96IQ7 327 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 LITAFQ99732 161 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BNQ99877 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST1H2BMQ99879 126 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 KIF25-AS1Q9Y6Z4 181 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 MEGF8Q7Z7M0 2845 aa3.62□□□□□ -1.83
HMGB1P4-201ENST00000455362 A0A0J9YXY3 114 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 PLAC8L1A1L4L8 177 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 SMIM9A6NGZ8 99 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 SERF1AO75920 110 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 CRYGDP07320 174 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 SCGB1A1P11684 91 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 PMVKQ15126 192 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 RRN3P1Q2M238 152 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 DEFB135Q30KP9 77 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 MRPL51Q4U2R6 128 aaKnown RBP3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 OCIAD2Q56VL3 154 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 AMN1Q8IY45 258 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 POM121L12Q8N7R1 296 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 DPH3P1Q9H4G8 78 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 U3KQK5 164 aa3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
HMGB1P4-201ENST00000455362 A8MWV9 139 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 EPM2AB3EWF7 344 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 K7EIL1 84 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 GAS8-AS1O95177 125 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 SMIM17P0DL12 118 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 SRIP30626 198 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 CKS2P33552 79 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 NDUFA6P56556 154 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 HERVK_113P61574 105 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 Q0VG73 95 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 LGALS9BQ3B8N2 356 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 NIT1Q86X76 327 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 OR10D4PQ8NGN7 298 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 OR11H2Q8NH07 326 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 ORAOV1Q8WV07 137 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 C16orf74Q96GX8 76 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRELID3AQ96N28 172 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 SAMD10Q9BYL1 202 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 NOP10Q9NPE3 64 aaKnown RBP3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 MRPL16Q9NX20 251 aaKnown RBP3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRGV1A0A0A0MS02 117 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 TRAV26-2A0A0B4J265 109 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 D6R8Y8 96 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 PSPHP1O15172 72 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 NCR2O95944 276 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 EMP1P54849 157 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 JOSD1Q15040 202 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 C6orf99Q4VX62 202 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 CASC10Q5T4H9 136 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 CFAP126Q5VTH2 177 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 Q6ZTI0 123 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 BAGE3Q86Y29 109 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 ORMDL3Q8N138 153 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 Q8N377 158 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 C18orf32Q8TCD1 76 aa3.59□□□□□ -1.83
HMGB1P4-201ENST00000455362 A0A1B0GV72 72 aa3.58□□□□□ -1.84
HMGB1P4-201ENST00000455362 M0QY20 66 aa3.58□□□□□ -1.84
HMGB1P4-201ENST00000455362 DEFB4AO15263 64 aa3.58□□□□□ -1.84
HMGB1P4-201ENST00000455362 NUPR1O60356 82 aa3.58□□□□□ -1.84
HMGB1P4-201ENST00000455362 NPYP01303 97 aa3.58□□□□□ -1.84
HMGB1P4-201ENST00000455362 MGPP08493 103 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms