RNA–Protein interactions for RNA: ENST00000454936.5

HDAC10-206, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-206ENST00000454936 TNFRSF18Q9Y5U5 241 aa12.09□□□□□ -0.47
HDAC10-206ENST00000454936 LINC00612Q8N6U2 182 aa12.08□□□□□ -0.48
HDAC10-206ENST00000454936 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
HDAC10-206ENST00000454936 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
HDAC10-206ENST00000454936 LYSTQ99698 3801 aa12.08□□□□□ -0.48
HDAC10-206ENST00000454936 RPL39P62891 51 aaKnown RBP12.07□□□□□ -0.48
HDAC10-206ENST00000454936 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
HDAC10-206ENST00000454936 OR4C5Q8NGB2 326 aa12.06□□□□□ -0.48
HDAC10-206ENST00000454936 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
HDAC10-206ENST00000454936 CST9LQ9H4G1 147 aa12.06□□□□□ -0.48
HDAC10-206ENST00000454936 PLECQ15149 4684 aaKnown RBP12.06□□□□□ -0.48
HDAC10-206ENST00000454936 A6NDN8 102 aa12.05□□□□□ -0.48
HDAC10-206ENST00000454936 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
HDAC10-206ENST00000454936 DYNC2H1Q8NCM8 4307 aaKnown RBP12.05□□□□□ -0.48
HDAC10-206ENST00000454936 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
HDAC10-206ENST00000454936 A0A0J9YY99 117 aa12.05□□□□□ -0.48
HDAC10-206ENST00000454936 TRBV25-1A0A075B6N4 114 aa12.04□□□□□ -0.48
HDAC10-206ENST00000454936 E9PLD3 99 aa12.04□□□□□ -0.48
HDAC10-206ENST00000454936 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
HDAC10-206ENST00000454936 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 HERVK_113P61574 105 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 IGLV4-69A0A075B6H9 119 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 TRAV26-1A0A087WT03 109 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 NPSP0C0P6 89 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
HDAC10-206ENST00000454936 TRGV4A0A0C4DH28 118 aa12.02□□□□□ -0.49
HDAC10-206ENST00000454936 TTTY13Q9BZ97 58 aa12.02□□□□□ -0.49
HDAC10-206ENST00000454936 MYMXA0A1B0GTQ4 84 aa12.01□□□□□ -0.49
HDAC10-206ENST00000454936 C11orf86A6NJI1 115 aa12.01□□□□□ -0.49
HDAC10-206ENST00000454936 CRYBA4P53673 196 aa12.01□□□□□ -0.49
HDAC10-206ENST00000454936 TAL2Q16559 108 aa12.01□□□□□ -0.49
HDAC10-206ENST00000454936 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
HDAC10-206ENST00000454936 H3BRM9 83 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 FHL2Q14192 279 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 PRADC1Q9BSG0 188 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 Q6ZVH6 145 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 VCX2Q9H322 139 aa11.99□□□□□ -0.49
HDAC10-206ENST00000454936 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 CIDEAO60543 219 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 TRBV10-1A0A0K0K1A3 114 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 UBE2V1Q13404 147 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 SPANXA1Q9NS26 97 aa11.98□□□□□ -0.49
HDAC10-206ENST00000454936 GCSHP23434 173 aa11.97□□□□□ -0.49
HDAC10-206ENST00000454936 COTL1Q14019 142 aa11.97□□□□□ -0.49
HDAC10-206ENST00000454936 TM2D2Q9BX73 214 aa11.97□□□□□ -0.49
HDAC10-206ENST00000454936 APLNQ9ULZ1 77 aa11.97□□□□□ -0.49
HDAC10-206ENST00000454936 K7EQD1 137 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 PAX4O43316 350 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 VAMP3Q15836 100 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 TMEM170BQ5T4T1 132 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 CEND1Q8N111 149 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 VSIG2Q96IQ7 327 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 PRO0255Q9UI72 69 aa11.96□□□□□ -0.49
HDAC10-206ENST00000454936 PTTG1IPP53801 180 aa11.96□□□□□ -0.5
HDAC10-206ENST00000454936 ZNRF2Q8NHG8 242 aa11.96□□□□□ -0.5
HDAC10-206ENST00000454936 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.5
HDAC10-206ENST00000454936 A0A096LPF7 62 aa11.95□□□□□ -0.5
HDAC10-206ENST00000454936 AMELXQ99217 191 aa11.95□□□□□ -0.5
HDAC10-206ENST00000454936 OPRPNQ99935 248 aaPredicted RBP11.95□□□□□ -0.5
HDAC10-206ENST00000454936 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 IGHV3-38A0A0C4DH36 116 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 ZNF815PA8K554 130 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 RPL36AP83881 106 aaKnown RBP11.94□□□□□ -0.5
HDAC10-206ENST00000454936 RPL36ALQ969Q0 106 aaKnown RBP11.94□□□□□ -0.5
HDAC10-206ENST00000454936 C9orf118A6NHY6 69 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 SMIM13P0DJ93 91 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 HIST1H4GQ99525 98 aa11.94□□□□□ -0.5
HDAC10-206ENST00000454936 UBE2D4Q9Y2X8 147 aa11.93□□□□□ -0.5
HDAC10-206ENST00000454936 GYPEP15421 78 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 FXYD2P54710 66 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
HDAC10-206ENST00000454936 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
HDAC10-206ENST00000454936 KMT2CQ8NEZ4 4911 aaKnown RBP11.92□□□□□ -0.5
HDAC10-206ENST00000454936 TRBV6-4A0A1B0GX49 114 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 LY6G6CO95867 125 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 GAGE4Q13068 117 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 GAGE5Q13069 117 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 GAGE13Q4V321 117 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 C15orf53Q8NAA6 179 aa11.92□□□□□ -0.5
HDAC10-206ENST00000454936 TMEM223A0PJW6 202 aa11.91□□□□□ -0.5
HDAC10-206ENST00000454936 CCL25O15444 150 aa11.91□□□□□ -0.5
HDAC10-206ENST00000454936 SCGB1D4Q6XE38 83 aa11.91□□□□□ -0.5
HDAC10-206ENST00000454936 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
HDAC10-206ENST00000454936 MRPS36P82909 103 aaKnown RBP11.9□□□□□ -0.5
HDAC10-206ENST00000454936 LEPROTO15243 131 aa11.9□□□□□ -0.51
HDAC10-206ENST00000454936 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.51
HDAC10-206ENST00000454936 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.51
HDAC10-206ENST00000454936 UBE2D3P61077 147 aa11.9□□□□□ -0.51
HDAC10-206ENST00000454936 UBE2D2P62837 147 aa11.9□□□□□ -0.51
HDAC10-206ENST00000454936 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.51
HDAC10-206ENST00000454936 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.51
HDAC10-206ENST00000454936 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
HDAC10-206ENST00000454936 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
HDAC10-206ENST00000454936 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
HDAC10-206ENST00000454936 J3QQQ9 107 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms