RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 hDV102S1A0JD36 115 aa9.37□□□□□ -0.91
HSPG2-207ENST00000453796 RPL32P62910 135 aaKnown RBP9.37□□□□□ -0.91
HSPG2-207ENST00000453796 SDIM1Q6ZPB5 146 aa9.37□□□□□ -0.91
HSPG2-207ENST00000453796 TMEM101Q96IK0 257 aa9.37□□□□□ -0.91
HSPG2-207ENST00000453796 BTF3L4Q96K17 158 aa9.37□□□□□ -0.91
HSPG2-207ENST00000453796 CDC42SE2Q9NRR3 84 aa9.37□□□□□ -0.91
HSPG2-207ENST00000453796 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-207ENST00000453796 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
HSPG2-207ENST00000453796 S100A8P05109 93 aa9.36□□□□□ -0.91
HSPG2-207ENST00000453796 IFITM2Q01629 132 aa9.36□□□□□ -0.91
HSPG2-207ENST00000453796 PNRC1Q12796 327 aaPredicted RBP9.36□□□□□ -0.91
HSPG2-207ENST00000453796 FOXI1Q12951 378 aa9.36□□□□□ -0.91
HSPG2-207ENST00000453796 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
HSPG2-207ENST00000453796 PANO1I0J062 215 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 TNFRSF6BO95407 300 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 FCER1GP30273 86 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 CKS2P33552 79 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 KRTAP10-4P60372 401 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-207ENST00000453796 ATP5L2Q7Z4Y8 100 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 CSDC2Q9Y534 153 aaKnown RBP9.35□□□□□ -0.91
HSPG2-207ENST00000453796 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.35□□□□□ -0.91
HSPG2-207ENST00000453796 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
HSPG2-207ENST00000453796 D6R8Y8 96 aa9.34□□□□□ -0.91
HSPG2-207ENST00000453796 F8W036 122 aa9.34□□□□□ -0.91
HSPG2-207ENST00000453796 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
HSPG2-207ENST00000453796 ZNF664Q8N3J9 261 aa9.34□□□□□ -0.91
HSPG2-207ENST00000453796 UBE2D4Q9Y2X8 147 aa9.34□□□□□ -0.91
HSPG2-207ENST00000453796 CCL25O15444 150 aa9.33□□□□□ -0.92
HSPG2-207ENST00000453796 NPYP01303 97 aa9.33□□□□□ -0.92
HSPG2-207ENST00000453796 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
HSPG2-207ENST00000453796 CIRBPQ14011 172 aaKnown RBP9.33□□□□□ -0.92
HSPG2-207ENST00000453796 ANAPC16Q96DE5 110 aa9.33□□□□□ -0.92
HSPG2-207ENST00000453796 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
HSPG2-207ENST00000453796 AP5S1Q9NUS5 200 aa9.33□□□□□ -0.92
HSPG2-207ENST00000453796 GVQW2A0A096LPI5 108 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-207ENST00000453796 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.32□□□□□ -0.92
HSPG2-207ENST00000453796 PHOX2AO14813 284 aa9.32□□□□□ -0.92
HSPG2-207ENST00000453796 PPBPP02775 128 aa9.32□□□□□ -0.92
HSPG2-207ENST00000453796 XCL1P47992 114 aa9.32□□□□□ -0.92
HSPG2-207ENST00000453796 TIMM21Q9BVV7 248 aa9.32□□□□□ -0.92
HSPG2-207ENST00000453796 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
HSPG2-207ENST00000453796 MT-ND4LP03901 98 aa9.31□□□□□ -0.92
HSPG2-207ENST00000453796 ADCYAP1P18509 176 aa9.31□□□□□ -0.92
HSPG2-207ENST00000453796 HIGD2BQ4VC39 106 aa9.31□□□□□ -0.92
HSPG2-207ENST00000453796 TCAPO15273 167 aa9.3□□□□□ -0.92
HSPG2-207ENST00000453796 SMAGPQ0VAQ4 97 aa9.3□□□□□ -0.92
HSPG2-207ENST00000453796 SS18Q15532 418 aa9.3□□□□□ -0.92
HSPG2-207ENST00000453796 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
HSPG2-207ENST00000453796 FAM104AQ969W3 186 aa9.3□□□□□ -0.92
HSPG2-207ENST00000453796 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
HSPG2-207ENST00000453796 RPL39P62891 51 aaKnown RBP9.29□□□□□ -0.92
HSPG2-207ENST00000453796 RNASE13Q5GAN3 156 aaKnown RBP9.29□□□□□ -0.92
HSPG2-207ENST00000453796 UQCC3Q6UW78 93 aa9.29□□□□□ -0.92
HSPG2-207ENST00000453796 Q6ZUT4 128 aa9.29□□□□□ -0.92
HSPG2-207ENST00000453796 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
HSPG2-207ENST00000453796 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
HSPG2-207ENST00000453796 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
HSPG2-207ENST00000453796 PRSS47A8MTI9 375 aa9.28□□□□□ -0.92
HSPG2-207ENST00000453796 TMEM136Q6ZRR5 245 aa9.28□□□□□ -0.92
HSPG2-207ENST00000453796 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
HSPG2-207ENST00000453796 TMEM218A2RU14 115 aa9.27□□□□□ -0.93
HSPG2-207ENST00000453796 C1orf196B1AJZ1 125 aa9.27□□□□□ -0.93
HSPG2-207ENST00000453796 CHTF8P0CG12 524 aa9.27□□□□□ -0.93
HSPG2-207ENST00000453796 SPACA4Q8TDM5 124 aa9.27□□□□□ -0.93
HSPG2-207ENST00000453796 SPANXA1Q9NS26 97 aa9.26□□□□□ -0.93
HSPG2-207ENST00000453796 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
HSPG2-207ENST00000453796 A0A087WYN8 130 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 MRPS36P82909 103 aaKnown RBP9.25□□□□□ -0.93
HSPG2-207ENST00000453796 COX6A2Q02221 97 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 PRSS3P2Q8NHM4 247 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 IMMP2LQ96T52 175 aa9.25□□□□□ -0.93
HSPG2-207ENST00000453796 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
HSPG2-207ENST00000453796 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
HSPG2-207ENST00000453796 HERC1Q15751 4861 aa9.23□□□□□ -0.93
HSPG2-207ENST00000453796 COX7A2LO14548 114 aa9.23□□□□□ -0.93
HSPG2-207ENST00000453796 RPL37AP61513 92 aaKnown RBP9.23□□□□□ -0.93
HSPG2-207ENST00000453796 SEC11CQ9BY50 192 aa9.23□□□□□ -0.93
HSPG2-207ENST00000453796 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
HSPG2-207ENST00000453796 CTDSP1Q9GZU7 261 aa9.22□□□□□ -0.93
HSPG2-207ENST00000453796 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
HSPG2-207ENST00000453796 PYGO1Q9Y3Y4 419 aa9.22□□□□□ -0.93
HSPG2-207ENST00000453796 LRP1Q07954 4544 aaKnown RBP9.21□□□□□ -0.93
HSPG2-207ENST00000453796 A0A096LNI7 61 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 LOC389332A0A1B0GUA5 103 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 KRTAP29-1A8MX34 341 aaPredicted RBP9.21□□□□□ -0.94
HSPG2-207ENST00000453796 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 RAB5AP20339 215 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 C5orf38Q86SI9 138 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 Q8N8P6 123 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 CARD19Q96LW7 228 aa9.21□□□□□ -0.94
HSPG2-207ENST00000453796 IGLV4-69A0A075B6H9 119 aa9.2□□□□□ -0.94
HSPG2-207ENST00000453796 IGLV4-3A0A075B6K6 122 aa9.2□□□□□ -0.94
HSPG2-207ENST00000453796 TRAV9-1A0A075B6T8 112 aa9.2□□□□□ -0.94
HSPG2-207ENST00000453796 IGHV3OR16-9A0A0B4J2B5 98 aa9.2□□□□□ -0.94
HSPG2-207ENST00000453796 MALP21145 153 aa9.2□□□□□ -0.94
HSPG2-207ENST00000453796 HNRNPA3P51991 378 aaKnown RBP9.2□□□□□ -0.94
HSPG2-207ENST00000453796 SYCNQ0VAF6 134 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms