RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 IGHV3-30P01768 117 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 IGHV3-33P01772 117 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 IGHV3-30-3P0DP02 117 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 IGHV3-30-5P0DP03 117 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 LINC01556Q5JQF7 62 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 LELP1Q5T871 98 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 Q6ZSN1 163 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 GTSF1LQ9H1H1 148 aa14.61□□□□□ -0.07
C9orf3-208ENST00000451893 GAGE12JA6NER3 117 aa14.6□□□□□ -0.07
C9orf3-208ENST00000451893 GAGE1Q13065 139 aa14.6□□□□□ -0.07
C9orf3-208ENST00000451893 GAGE4Q13068 117 aa14.6□□□□□ -0.07
C9orf3-208ENST00000451893 GAGE5Q13069 117 aa14.6□□□□□ -0.07
C9orf3-208ENST00000451893 GAGE13Q4V321 117 aa14.6□□□□□ -0.07
C9orf3-208ENST00000451893 SMIM6P0DI80 62 aa14.59□□□□□ -0.07
C9orf3-208ENST00000451893 RPL36AP83881 106 aaKnown RBP14.59□□□□□ -0.07
C9orf3-208ENST00000451893 NEXN-AS1Q8NBZ9 246 aa14.59□□□□□ -0.07
C9orf3-208ENST00000451893 RPL36ALQ969Q0 106 aaKnown RBP14.59□□□□□ -0.07
C9orf3-208ENST00000451893 TRBV7-3A0A075B6L6 115 aa14.57□□□□□ -0.08
C9orf3-208ENST00000451893 JOSD1Q15040 202 aaPredicted RBP14.57□□□□□ -0.08
C9orf3-208ENST00000451893 PMCHL1Q16048 86 aa14.57□□□□□ -0.08
C9orf3-208ENST00000451893 A0A096LNJ9 63 aa14.56□□□□□ -0.08
C9orf3-208ENST00000451893 LRP1BQ9NZR2 4599 aa14.56□□□□□ -0.08
C9orf3-208ENST00000451893 IBA57-AS1B1ANH7 110 aa14.55□□□□□ -0.08
C9orf3-208ENST00000451893 MAP1LC3CQ9BXW4 147 aa14.55□□□□□ -0.08
C9orf3-208ENST00000451893 IGLV5-52A0A0A0MRZ9 124 aa14.54□□□□□ -0.08
C9orf3-208ENST00000451893 ATP5LO75964 103 aa14.54□□□□□ -0.08
C9orf3-208ENST00000451893 GCSHP23434 173 aa14.54□□□□□ -0.08
C9orf3-208ENST00000451893 DAZ4Q86SG3 579 aaKnown RBP14.54□□□□□ -0.08
C9orf3-208ENST00000451893 DAZ3Q9NR90 486 aaKnown RBP14.54□□□□□ -0.08
C9orf3-208ENST00000451893 ABCA13Q86UQ4 5058 aa14.54□□□□□ -0.08
C9orf3-208ENST00000451893 EPM2AB3EWF7 344 aa14.53□□□□□ -0.08
C9orf3-208ENST00000451893 TOMM6Q96B49 74 aa14.53□□□□□ -0.08
C9orf3-208ENST00000451893 TM2D2Q9BX73 214 aa14.53□□□□□ -0.08
C9orf3-208ENST00000451893 HSPG2P98160 4391 aa14.53□□□□□ -0.08
C9orf3-208ENST00000451893 C3orf79P0CE67 100 aa14.52□□□□□ -0.09
C9orf3-208ENST00000451893 KRTDAPP60985 99 aa14.52□□□□□ -0.09
C9orf3-208ENST00000451893 TSHBP01222 138 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 UBE2D3P61077 147 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 UBE2D2P62837 147 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 PYY3Q5JQD4 70 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 LINC00518Q8N0U6 118 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 CYSLTR1Q9Y271 337 aa14.51□□□□□ -0.09
C9orf3-208ENST00000451893 COTL1Q14019 142 aa14.5□□□□□ -0.09
C9orf3-208ENST00000451893 TMEM97Q5BJF2 176 aa14.5□□□□□ -0.09
C9orf3-208ENST00000451893 NTN5Q8WTR8 489 aaPredicted RBP14.5□□□□□ -0.09
C9orf3-208ENST00000451893 IFI27L1Q96BM0 104 aa14.5□□□□□ -0.09
C9orf3-208ENST00000451893 C20orf202A1L168 122 aa14.49□□□□□ -0.09
C9orf3-208ENST00000451893 SYS1-DBNDD2H3BUS1 97 aa14.49□□□□□ -0.09
C9orf3-208ENST00000451893 SCGB1D1O95968 90 aa14.49□□□□□ -0.09
C9orf3-208ENST00000451893 C2orf66Q6UXQ4 117 aa14.49□□□□□ -0.09
C9orf3-208ENST00000451893 TRAV8-3A0A0A6YYJ7 113 aa14.48□□□□□ -0.09
C9orf3-208ENST00000451893 KRTAP10-1P60331 282 aa14.48□□□□□ -0.09
C9orf3-208ENST00000451893 ERASQ7Z444 233 aa14.48□□□□□ -0.09
C9orf3-208ENST00000451893 Q9UF83 564 aa14.48□□□□□ -0.09
C9orf3-208ENST00000451893 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.47□□□□□ -0.09
C9orf3-208ENST00000451893 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
C9orf3-208ENST00000451893 TMEM141Q96I45 108 aa14.47□□□□□ -0.09
C9orf3-208ENST00000451893 SCGB3A1Q96QR1 104 aa14.47□□□□□ -0.09
C9orf3-208ENST00000451893 DNAH5Q8TE73 4624 aa14.47□□□□□ -0.09
C9orf3-208ENST00000451893 NPSP0C0P6 89 aa14.46□□□□□ -0.09
C9orf3-208ENST00000451893 SMAGPQ0VAQ4 97 aa14.46□□□□□ -0.09
C9orf3-208ENST00000451893 LINC00173Q6ZV60 143 aa14.46□□□□□ -0.09
C9orf3-208ENST00000451893 Q8N814 137 aa14.46□□□□□ -0.09
C9orf3-208ENST00000451893 C12orf57Q99622 126 aa14.46□□□□□ -0.09
C9orf3-208ENST00000451893 LINC00694P0DN24 101 aa14.45□□□□□ -0.1
C9orf3-208ENST00000451893 RMI2Q96E14 147 aa14.45□□□□□ -0.1
C9orf3-208ENST00000451893 TIMM17AQ99595 171 aa14.45□□□□□ -0.1
C9orf3-208ENST00000451893 A0A087WX48 190 aa14.44□□□□□ -0.1
C9orf3-208ENST00000451893 LRCOL1A6NCL2 159 aa14.44□□□□□ -0.1
C9orf3-208ENST00000451893 XGP55808 180 aa14.43□□□□□ -0.1
C9orf3-208ENST00000451893 Q6ZN92 141 aa14.43□□□□□ -0.1
C9orf3-208ENST00000451893 Q8N3U1 123 aa14.43□□□□□ -0.1
C9orf3-208ENST00000451893 PYGO1Q9Y3Y4 419 aa14.43□□□□□ -0.1
C9orf3-208ENST00000451893 COX11Q9Y6N1 276 aa14.43□□□□□ -0.1
C9orf3-208ENST00000451893 APOBP04114 4563 aaKnown RBP14.42□□□□□ -0.1
C9orf3-208ENST00000451893 PRSS1P07477 247 aa14.42□□□□□ -0.1
C9orf3-208ENST00000451893 S100A12P80511 92 aa14.42□□□□□ -0.1
C9orf3-208ENST00000451893 PAPPA-AS1Q5QFB9 102 aa14.42□□□□□ -0.1
C9orf3-208ENST00000451893 LINC01545Q5VT33 79 aa14.42□□□□□ -0.1
C9orf3-208ENST00000451893 TRAV12-1A0A0B4J245 112 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 IGIPA6NJ69 53 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 H7C423 109 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 Q5VSD8 79 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 Q8N976 141 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 CHCHD7Q9BUK0 85 aa14.41□□□□□ -0.1
C9orf3-208ENST00000451893 TIMM21Q9BVV7 248 aa14.4□□□□□ -0.1
C9orf3-208ENST00000451893 IGKV2D-24A0A075B6R9 120 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 TMEM262E9PQX1 116 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 FAM229AH3BQW9 127 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 LECT2O14960 151 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 SMR3BP02814 79 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-208ENST00000451893 INAFM2P0DMQ5 153 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 TEX43Q6ZNM6 134 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 SPANXA1Q9NS26 97 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 KLK12Q9UKR0 248 aa14.39□□□□□ -0.11
C9orf3-208ENST00000451893 HAMPP81172 84 aa14.38□□□□□ -0.11
C9orf3-208ENST00000451893 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-208ENST00000451893 TRBV25-1A0A075B6N4 114 aa14.37□□□□□ -0.11
C9orf3-208ENST00000451893 RPL39P62891 51 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms