RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KLK9Q2XQG4 91 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 ASB16-AS1Q495Z4 193 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 ENHOQ6UWT2 76 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 Q8N6K4 173 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 ZNRF1Q8ND25 227 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 CCL4L1Q8NHW4 92 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 RPL39LQ96EH5 51 aaKnown RBP2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 KLK9Q9UKQ9 250 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 SNURFQ9Y675 71 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 CACNA1DQ01668 2161 aa2.5□□□□□ -2.01
HMGB3P8-201ENST00000449709 ZFHX3Q15911 3703 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 PRR14LQ5THK1 2151 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGKV2-40A0A087WW87 121 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 TRAV10A0A0B4J240 114 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGHV3-38A0A0C4DH36 116 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 LOC101927531A0A1B0GV80 90 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGKV2-29A2NJV5 120 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 BUB1B-PAK6H3BSN5 160 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 LY6G6DO95868 133 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGKV2D-40P01614 121 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 UBE2AP49459 152 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 C9orf66Q5T8R8 295 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 C20orf203Q8NBC4 194 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 C11orf72Q8NBR9 251 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 CCL17Q92583 94 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 ZNF580Q9UK33 172 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 CADP27708 2225 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 CENPFP49454 3210 aa2.49□□□□□ -2.01
HMGB3P8-201ENST00000449709 SVILO95425 2214 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 IGHV3-15A0A0B4J1V0 119 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 F6UB75 175 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 K7EIM0 57 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 PSCAO43653 123 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 LYZP61626 148 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 RPL39P62891 51 aaKnown RBP2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 NREPQ16612 68 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 DEFB114Q30KQ6 69 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 C10orf55Q5SWW7 151 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 LINC00242Q5T6M2 205 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 LINC00269Q8N2A0 174 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 Q8TAT8 98 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 PATE1Q8WXA2 126 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 UBL5Q9BZL1 73 aa2.48□□□□□ -2.01
HMGB3P8-201ENST00000449709 SRCAPQ6ZRS2 3230 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 A0A087WYN8 130 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 A0A0J9YXV3 536 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 A8MU10 97 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 K7EQG2 157 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 CXCL17Q6UXB2 119 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 Q6ZQT0 140 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 Q6ZS52 159 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 C1orf64Q8NEQ6 169 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 PLAC8Q9NZF1 115 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 ZGRF1Q86YA3 2104 aa2.47□□□□□ -2.01
HMGB3P8-201ENST00000449709 MUC4Q99102 2169 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV2-28A0A075B6P5 120 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 TRAV12-3A0A0B4J271 114 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 C3orf84H3BNL1 204 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 NCR3O14931 201 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGKV2D-28P01615 120 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 RNASE3P12724 160 aaKnown RBP2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 PDE6GP18545 87 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 RPL27AP46776 148 aaKnown RBP2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 LINC00313P59037 77 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 ELOF1P60002 83 aaKnown RBP2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 LCE1AQ5T7P2 110 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 SPANXN1Q5VSR9 72 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 ZFAND2AQ8N6M9 145 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 NKAPP1Q8N9T2 125 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 WFDC9Q8NEX5 89 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 Q9BRP9 147 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 LIMD2Q9BT23 127 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 CDC42SE2Q9NRR3 84 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 DEC1Q9P2X7 70 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 DOCK10Q96BY6 2186 aa2.46□□□□□ -2.02
HMGB3P8-201ENST00000449709 C5orf67F2Z3F1 127 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 C19orf84I3L1E1 186 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 M0QY20 66 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV3-48P01763 117 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 CCL14Q16627 93 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 PRR9Q5T870 116 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 C18orf65Q6ZTR6 163 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 NOTCH2NLQ7Z3S9 236 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 Q8N9P0 234 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 ITLN2Q8WWU7 325 aaPredicted RBP2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 RNF5Q99942 180 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 ORMDL1Q9P0S3 153 aa2.45□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGLV11-55A0A075B6I3 123 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGLV3-9A0A075B6K5 115 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV4-30-2A0A087WSY4 118 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 IGHV1-3A0A0C4DH29 117 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 H0Y9J4 135 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 H3BQ85 93 aa2.44□□□□□ -2.02
HMGB3P8-201ENST00000449709 BPY2O14599 106 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms