RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 CHCHD10Q8WYQ3 142 aaPredicted RBP9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
RTFDC1-204ENST00000449062 HBBP68871 147 aa9.05□□□□□ -0.96
RTFDC1-204ENST00000449062 MRPL54Q6P161 138 aaKnown RBP9.05□□□□□ -0.96
RTFDC1-204ENST00000449062 C15orf56Q8N910 161 aa9.05□□□□□ -0.96
RTFDC1-204ENST00000449062 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 CKS2P33552 79 aa9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 FOXI1Q12951 378 aa9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
RTFDC1-204ENST00000449062 hDV102S1A0JD36 115 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 C7orf77A4D0Y5 90 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 PANO1I0J062 215 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 TNFRSF6BO95407 300 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 S100A8P05109 93 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 ATP5L2Q7Z4Y8 100 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 ZNF664Q8N3J9 261 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
RTFDC1-204ENST00000449062 D6R8Y8 96 aa9.02□□□□□ -0.97
RTFDC1-204ENST00000449062 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
RTFDC1-204ENST00000449062 TMEM101Q96IK0 257 aa9.02□□□□□ -0.97
RTFDC1-204ENST00000449062 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
RTFDC1-204ENST00000449062 UBE2D4Q9Y2X8 147 aa9.02□□□□□ -0.97
RTFDC1-204ENST00000449062 F8W036 122 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 PHOX2AO14813 284 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 NPYP01303 97 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 PPBPP02775 128 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 MT-ND4LP03901 98 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 FCER1GP30273 86 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 CIRBPQ14011 172 aaKnown RBP9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 ANAPC16Q96DE5 110 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 KIR2DL4Q99706 377 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 TIMM21Q9BVV7 248 aa9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
RTFDC1-204ENST00000449062 PRSS47A8MTI9 375 aa9□□□□□ -0.97
RTFDC1-204ENST00000449062 ADCYAP1P18509 176 aa9□□□□□ -0.97
RTFDC1-204ENST00000449062 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
RTFDC1-204ENST00000449062 CCL25O15444 150 aa8.99□□□□□ -0.97
RTFDC1-204ENST00000449062 XCL1P47992 114 aa8.99□□□□□ -0.97
RTFDC1-204ENST00000449062 TMEM136Q6ZRR5 245 aa8.99□□□□□ -0.97
RTFDC1-204ENST00000449062 SMIM2Q9BVW6 85 aa8.99□□□□□ -0.97
RTFDC1-204ENST00000449062 TMEM218A2RU14 115 aa8.98□□□□□ -0.97
RTFDC1-204ENST00000449062 UQCC3Q6UW78 93 aa8.98□□□□□ -0.97
RTFDC1-204ENST00000449062 CD164L2Q6UWJ8 174 aa8.98□□□□□ -0.97
RTFDC1-204ENST00000449062 AP5S1Q9NUS5 200 aa8.98□□□□□ -0.97
RTFDC1-204ENST00000449062 LRP1Q07954 4544 aaKnown RBP8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 TCAPO15273 167 aa8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 RPL39P62891 51 aaKnown RBP8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 SS18Q15532 418 aa8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 HIGD2BQ4VC39 106 aa8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 ORMDL3Q8N138 153 aa8.97□□□□□ -0.97
RTFDC1-204ENST00000449062 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
RTFDC1-204ENST00000449062 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.96□□□□□ -0.98
RTFDC1-204ENST00000449062 C1orf196B1AJZ1 125 aa8.96□□□□□ -0.98
RTFDC1-204ENST00000449062 PRELID3AQ96N28 172 aa8.96□□□□□ -0.98
RTFDC1-204ENST00000449062 SMAGPQ0VAQ4 97 aa8.95□□□□□ -0.98
RTFDC1-204ENST00000449062 RNASE13Q5GAN3 156 aaKnown RBP8.95□□□□□ -0.98
RTFDC1-204ENST00000449062 Q6ZUT4 128 aa8.95□□□□□ -0.98
RTFDC1-204ENST00000449062 IMMP2LQ96T52 175 aa8.95□□□□□ -0.98
RTFDC1-204ENST00000449062 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
RTFDC1-204ENST00000449062 IGHV1-58A0A0C4DH39 117 aa8.94□□□□□ -0.98
RTFDC1-204ENST00000449062 MRPS36P82909 103 aaKnown RBP8.94□□□□□ -0.98
RTFDC1-204ENST00000449062 PRSS3P2Q8NHM4 247 aa8.94□□□□□ -0.98
RTFDC1-204ENST00000449062 TMEM18Q96B42 140 aa8.94□□□□□ -0.98
RTFDC1-204ENST00000449062 LAMTOR2Q9Y2Q5 125 aa8.94□□□□□ -0.98
RTFDC1-204ENST00000449062 CHTF8P0CG12 524 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 COX6A2Q02221 97 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 LINC00526Q96FQ7 95 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 SPANXA1Q9NS26 97 aa8.93□□□□□ -0.98
RTFDC1-204ENST00000449062 A0A087WYN8 130 aa8.92□□□□□ -0.98
RTFDC1-204ENST00000449062 TRAV13-1A0A0B4J241 112 aa8.92□□□□□ -0.98
RTFDC1-204ENST00000449062 C10orf91Q5T1B1 145 aa8.92□□□□□ -0.98
RTFDC1-204ENST00000449062 CTDSP1Q9GZU7 261 aa8.92□□□□□ -0.98
RTFDC1-204ENST00000449062 PYGO1Q9Y3Y4 419 aa8.92□□□□□ -0.98
RTFDC1-204ENST00000449062 PLAC8Q9NZF1 115 aa8.91□□□□□ -0.98
RTFDC1-204ENST00000449062 FAT3Q8TDW7 4589 aa8.91□□□□□ -0.98
RTFDC1-204ENST00000449062 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
RTFDC1-204ENST00000449062 IGHV3OR16-9A0A0B4J2B5 98 aa8.9□□□□□ -0.98
RTFDC1-204ENST00000449062 COX7A2LO14548 114 aa8.9□□□□□ -0.98
RTFDC1-204ENST00000449062 RAB5AP20339 215 aa8.9□□□□□ -0.98
RTFDC1-204ENST00000449062 Q8N8P6 123 aa8.9□□□□□ -0.98
RTFDC1-204ENST00000449062 TRAV9-1A0A075B6T8 112 aa8.89□□□□□ -0.99
RTFDC1-204ENST00000449062 LOC389332A0A1B0GUA5 103 aa8.89□□□□□ -0.99
RTFDC1-204ENST00000449062 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
RTFDC1-204ENST00000449062 COMMD7Q86VX2 200 aa8.89□□□□□ -0.99
RTFDC1-204ENST00000449062 IGLV4-69A0A075B6H9 119 aa8.88□□□□□ -0.99
RTFDC1-204ENST00000449062 KRTAP29-1A8MX34 341 aaPredicted RBP8.88□□□□□ -0.99
RTFDC1-204ENST00000449062 HNRNPA3P51991 378 aaKnown RBP8.88□□□□□ -0.99
RTFDC1-204ENST00000449062 SYCNQ0VAF6 134 aa8.88□□□□□ -0.99
RTFDC1-204ENST00000449062 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
RTFDC1-204ENST00000449062 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
RTFDC1-204ENST00000449062 A0A096LNI7 61 aa8.87□□□□□ -0.99
RTFDC1-204ENST00000449062 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms