RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	LINC01356	Q8N9X3	169 aa		4.91	□□□□□ -1.62
TRIM6-205	ENST00000445329	RPL39L	Q96EH5	51 aa	Known RBP	4.91	□□□□□ -1.62
TRIM6-205	ENST00000445329	SEM1	Q6ZVN7	128 aa		4.9	□□□□□ -1.62
TRIM6-205	ENST00000445329	TMEM254	Q8TBM7	123 aa		4.9	□□□□□ -1.62
TRIM6-205	ENST00000445329	DIRC1	Q969H9	104 aa		4.9	□□□□□ -1.62
TRIM6-205	ENST00000445329	BBC3	Q96PG8	261 aa	Predicted RBP	4.9	□□□□□ -1.62
TRIM6-205	ENST00000445329	KMT2B	Q9UMN6	2715 aa	Predicted RBP	4.9	□□□□□ -1.62
TRIM6-205	ENST00000445329	IGHV3-21	A0A0B4J1V1	117 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	TRBV7-4	A0A0J9YYF1	115 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	TRBV10-3	A0A0K0K1G6	114 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	C16orf90	A8MZG2	172 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	SPANXN1	Q5VSR9	72 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	HCP5	Q6MZN7	132 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	TMEM141	Q96I45	108 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	NAV3	Q8IVL0	2385 aa		4.9	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGHV1OR15-1	A0A075B7D0	117 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329		A6NN06	94 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	BUB1B-PAK6	H3BSN5	160 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	UBE2A	P49459	152 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	RPL39	P62891	51 aa	Known RBP	4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	C9orf106	Q8NAJ2	232 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329		Q9H8V8	135 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	ESM1	Q9NQ30	184 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	TMEM14C	Q9P0S9	112 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	FAM215A	Q9Y5M1	114 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	PCNX1	Q96RV3	2341 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	hDV103S1	A0JD37	113 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	S100A4	P26447	101 aa	Known RBP	4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	PRB3	Q04118	309 aa	Predicted RBP	4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329		Q6ZTC4	211 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	ZNF575	Q86XF7	245 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGHV1-69D	A0A0B4J2H0	117 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGHV3-9	P01782	118 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGHV3-30-3	P0DP02	117 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	RNASE13	Q5GAN3	156 aa	Known RBP	4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	GPHB5	Q86YW7	130 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	UBL5	Q9BZL1	73 aa		4.89	□□□□□ -1.63
TRIM6-205	ENST00000445329	PRY	O14603	147 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	NDUFA12	Q9UI09	145 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	CHD6	Q8TD26	2715 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGKV3D-15	A0A087WSY6	115 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	LINC00313	P59037	77 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	TMEM30B	Q3MIR4	351 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	ATP11AUN	Q6ZP68	121 aa		4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329	C1orf229	Q6ZS94	237 aa	Predicted RBP	4.88	□□□□□ -1.63
TRIM6-205	ENST00000445329		A0A0A0MQY5	61 aa		4.87	□□□□□ -1.63
TRIM6-205	ENST00000445329	HCG22	E2RYF7	251 aa		4.87	□□□□□ -1.63
TRIM6-205	ENST00000445329	CHKB-CPT1B	H3BT56	60 aa		4.87	□□□□□ -1.63
TRIM6-205	ENST00000445329	LYPD1	Q8N2G4	141 aa		4.87	□□□□□ -1.63
TRIM6-205	ENST00000445329	MGP	P08493	103 aa		4.87	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGKV1-16	P04430	117 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	OBSCN-AS1	Q96MR7	158 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	FLNC	Q14315	2725 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	MRPL33	O75394	65 aa	Known RBP	4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	SAA1	P0DJI8	122 aa	Predicted RBP	4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	WT1-AS	Q06250	92 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	NREP	Q16612	68 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	CNEP1R1	Q8N9A8	125 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	CCL13	Q99616	98 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	NDUFA4L2	Q9NRX3	87 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	UTP20	O75691	2785 aa	Known RBP	4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329		A0A0J9YXV3	536 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	SAA2	P0DJI9	122 aa	Predicted RBP	4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	C10orf55	Q5SWW7	151 aa		4.86	□□□□□ -1.63
TRIM6-205	ENST00000445329	HIVEP3	Q5T1R4	2406 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	MIR7-3HG	Q8N6C7	128 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	LRBA	P50851	2863 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	ZNF503-AS2	A6NEH8	195 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	LINC01554	Q52M75	96 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329		Q5VV11	94 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	COX8C	Q7Z4L0	72 aa		4.85	□□□□□ -1.63
TRIM6-205	ENST00000445329	SORL1	Q92673	2214 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329		A0A087WYN8	130 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	RNF223	E7ERA6	249 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	C11orf72	Q8NBR9	251 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	C1orf64	Q8NEQ6	169 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	DCHS2	Q6V1P9	2916 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	ZNF462	Q96JM2	2506 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329		A0A096LPE4	126 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGKV3D-20	A0A0C4DH25	116 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329		A0A1W2PPZ6	126 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	IGHV1-2	P23083	117 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	HAMP	P81172	84 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	ZNF843	Q8N446	348 aa		4.84	□□□□□ -1.63
TRIM6-205	ENST00000445329	ABCA1	O95477	2261 aa		4.84	□□□□□ -1.64
TRIM6-205	ENST00000445329	NBPF19	A0A087WUL8	3843 aa		4.84	□□□□□ -1.64
TRIM6-205	ENST00000445329	GNLY	P22749	145 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	MP68	P56378	58 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329		Q8N3U1	123 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	MALRD1	Q5VYJ5	2156 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	CTSG	P08311	255 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	C22orf34	Q6ZV56	151 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	LINC00308	Q8TCZ7	52 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	VPS13C	Q709C8	3753 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	CRYBG3	Q68DQ2	2970 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	UBR5	O95071	2799 aa	Predicted RBP	4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	IGHV7-4-1	A0A0J9YVY3	117 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	APELA	P0DMC3	54 aa		4.83	□□□□□ -1.64
TRIM6-205	ENST00000445329	ZNF833P	Q6ZTB9	187 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms