RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
SSBP3-208ENST00000444533 TIMM21Q9BVV7 248 aa9.42□□□□□ -0.9
SSBP3-208ENST00000444533 A0A087WTM6 91 aa9.41□□□□□ -0.9
SSBP3-208ENST00000444533 SS18Q15532 418 aa9.41□□□□□ -0.9
SSBP3-208ENST00000444533 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
SSBP3-208ENST00000444533 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
SSBP3-208ENST00000444533 UBE2D4Q9Y2X8 147 aa9.41□□□□□ -0.9
SSBP3-208ENST00000444533 IGLV10-54A0A075B6I4 117 aa9.4□□□□□ -0.9
SSBP3-208ENST00000444533 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
SSBP3-208ENST00000444533 RAB5BP61020 215 aa9.4□□□□□ -0.9
SSBP3-208ENST00000444533 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
SSBP3-208ENST00000444533 CCL25O15444 150 aa9.39□□□□□ -0.91
SSBP3-208ENST00000444533 RPL39P62891 51 aaKnown RBP9.39□□□□□ -0.91
SSBP3-208ENST00000444533 Q6ZN92 141 aa9.39□□□□□ -0.91
SSBP3-208ENST00000444533 PGPEP1Q9NXJ5 209 aa9.39□□□□□ -0.91
SSBP3-208ENST00000444533 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
SSBP3-208ENST00000444533 C2orf66Q6UXQ4 117 aa9.38□□□□□ -0.91
SSBP3-208ENST00000444533 SPATA12Q7Z6I5 190 aa9.38□□□□□ -0.91
SSBP3-208ENST00000444533 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
SSBP3-208ENST00000444533 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
SSBP3-208ENST00000444533 A0A1B0GVY2 172 aa9.37□□□□□ -0.91
SSBP3-208ENST00000444533 CDPF1Q6NVV7 123 aa9.37□□□□□ -0.91
SSBP3-208ENST00000444533 CFAP161Q6P656 301 aa9.37□□□□□ -0.91
SSBP3-208ENST00000444533 PYGO1Q9Y3Y4 419 aa9.37□□□□□ -0.91
SSBP3-208ENST00000444533 LINC00959A0A1B0GUT2 108 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 C16orf90A8MZG2 172 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 LECT2O14960 151 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 S100A1P23297 94 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 MRPS36P82909 103 aaKnown RBP9.36□□□□□ -0.91
SSBP3-208ENST00000444533 Q8N814 137 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 NTN5Q8WTR8 489 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-208ENST00000444533 CHCHD10Q8WYQ3 142 aaPredicted RBP9.36□□□□□ -0.91
SSBP3-208ENST00000444533 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 AP5S1Q9NUS5 200 aa9.36□□□□□ -0.91
SSBP3-208ENST00000444533 TRAV13-1A0A0B4J241 112 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 LRCOL1A6NCL2 159 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 GAGE12HA6NDE8 117 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 NPSP0C0P6 89 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 XCL1P47992 114 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 Q6ZUT4 128 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
SSBP3-208ENST00000444533 IFITM10A6NMD0 228 aa9.34□□□□□ -0.91
SSBP3-208ENST00000444533 LINC00614P0C842 121 aa9.34□□□□□ -0.91
SSBP3-208ENST00000444533 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
SSBP3-208ENST00000444533 TEX43Q6ZNM6 134 aa9.34□□□□□ -0.91
SSBP3-208ENST00000444533 C18orf32Q8TCD1 76 aa9.34□□□□□ -0.91
SSBP3-208ENST00000444533 VCX2Q9H322 139 aa9.34□□□□□ -0.91
SSBP3-208ENST00000444533 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
SSBP3-208ENST00000444533 USP17L23D6RBM5 183 aa9.33□□□□□ -0.92
SSBP3-208ENST00000444533 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
SSBP3-208ENST00000444533 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
SSBP3-208ENST00000444533 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 TRGC2P03986 189 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 MALP21145 153 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 BAGE3Q86Y29 109 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 MAPKAPK5-AS1Q8N8E1 139 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 DNAH2Q9P225 4427 aa9.32□□□□□ -0.92
SSBP3-208ENST00000444533 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-208ENST00000444533 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
SSBP3-208ENST00000444533 COLCA2A8K830 154 aa9.31□□□□□ -0.92
SSBP3-208ENST00000444533 ERASQ7Z444 233 aa9.31□□□□□ -0.92
SSBP3-208ENST00000444533 TIMM17AQ99595 171 aa9.31□□□□□ -0.92
SSBP3-208ENST00000444533 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 hDV102S1A0JD36 115 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 COX7A2LO14548 114 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 SCO1O75880 301 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
SSBP3-208ENST00000444533 OPRPNQ99935 248 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-208ENST00000444533 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
SSBP3-208ENST00000444533 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-208ENST00000444533 APOMO95445 188 aa9.29□□□□□ -0.92
SSBP3-208ENST00000444533 HBDP02042 147 aa9.29□□□□□ -0.92
SSBP3-208ENST00000444533 SEC11AP67812 179 aa9.29□□□□□ -0.92
SSBP3-208ENST00000444533 KRTAP26-1Q6PEX3 210 aa9.29□□□□□ -0.92
SSBP3-208ENST00000444533 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.28□□□□□ -0.92
SSBP3-208ENST00000444533 IGHV1-58A0A0C4DH39 117 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 IGIPA6NJ69 53 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 ATP6V1G1O75348 118 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 GCSHP23434 173 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 FOXI1Q12951 378 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 WFDC2Q14508 124 aa9.28□□□□□ -0.92
SSBP3-208ENST00000444533 HSBP1O75506 76 aa9.27□□□□□ -0.93
SSBP3-208ENST00000444533 ZNF561-AS1K7EIQ3 104 aa9.26□□□□□ -0.93
SSBP3-208ENST00000444533 ATP5LO75964 103 aa9.26□□□□□ -0.93
SSBP3-208ENST00000444533 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
SSBP3-208ENST00000444533 PRSS1P07477 247 aa9.25□□□□□ -0.93
SSBP3-208ENST00000444533 AMELXQ99217 191 aa9.25□□□□□ -0.93
SSBP3-208ENST00000444533 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
SSBP3-208ENST00000444533 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 FUSP35637 526 aaKnown RBP eCLIP9.24□□□□□ -0.93
SSBP3-208ENST00000444533 UBE2D1P51668 147 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 NDUFA6P56556 154 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 HERVK_113P63121 156 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 HIGD2BQ4VC39 106 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
SSBP3-208ENST00000444533 PMVKQ15126 192 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms