RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
PTPRE-203ENST00000442830 LINC00959A0A1B0GUT2 108 aa8.66□□□□□ -1.02
PTPRE-203ENST00000442830 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
PTPRE-203ENST00000442830 GATCO43716 136 aaKnown RBP8.66□□□□□ -1.02
PTPRE-203ENST00000442830 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
PTPRE-203ENST00000442830 ST20Q9HBF5 79 aa8.66□□□□□ -1.02
PTPRE-203ENST00000442830 A0A096LNI7 61 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 K7EN84 100 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 XCL1P47992 114 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 FOXA3P55318 350 aaPredicted RBP8.65□□□□□ -1.02
PTPRE-203ENST00000442830 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 Q6ZRP5 223 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
PTPRE-203ENST00000442830 TCTE3Q8IZS6 198 aa8.65□□□□□ -1.02
PTPRE-203ENST00000442830 TNXBP22105 4242 aa8.64□□□□□ -1.03
PTPRE-203ENST00000442830 A0A0J9YXV3 536 aa8.64□□□□□ -1.03
PTPRE-203ENST00000442830 PPP1R17O96001 155 aa8.64□□□□□ -1.03
PTPRE-203ENST00000442830 ESDP10768 282 aa8.64□□□□□ -1.03
PTPRE-203ENST00000442830 C7orf77A4D0Y5 90 aa8.63□□□□□ -1.03
PTPRE-203ENST00000442830 FAM231BA6NCW3 169 aa8.63□□□□□ -1.03
PTPRE-203ENST00000442830 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
PTPRE-203ENST00000442830 SYCNQ0VAF6 134 aa8.63□□□□□ -1.03
PTPRE-203ENST00000442830 LYPD6BQ8NI32 183 aa8.63□□□□□ -1.03
PTPRE-203ENST00000442830 TRBV27A0A0K0K1C4 114 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 LOC107984640A0A0U1RRK4 108 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 A0A1B0GUT8 65 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 CAMPP49913 170 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
PTPRE-203ENST00000442830 C1orf196B1AJZ1 125 aa8.61□□□□□ -1.03
PTPRE-203ENST00000442830 TSHBP01222 138 aa8.61□□□□□ -1.03
PTPRE-203ENST00000442830 MALP21145 153 aa8.61□□□□□ -1.03
PTPRE-203ENST00000442830 ZNF664Q8N3J9 261 aa8.61□□□□□ -1.03
PTPRE-203ENST00000442830 CSDC2Q9Y534 153 aaKnown RBP8.61□□□□□ -1.03
PTPRE-203ENST00000442830 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 FCER1GP30273 86 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 PTTG1IPP53801 180 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 POLR2KP53803 58 aaKnown RBP8.6□□□□□ -1.03
PTPRE-203ENST00000442830 TSKUQ8WUA8 353 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 TMEM18Q96B42 140 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
PTPRE-203ENST00000442830 HIGD1CA8MV81 97 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 COX7A2LO14548 114 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 VCYO14598 125 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 TCAPO15273 167 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 APOMO95445 188 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 KIR2DL4Q99706 377 aa8.59□□□□□ -1.03
PTPRE-203ENST00000442830 LRP2P98164 4655 aa8.58□□□□□ -1.04
PTPRE-203ENST00000442830 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
PTPRE-203ENST00000442830 F8WDY8 70 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 RAB4AP20338 218 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTPRE-203ENST00000442830 RIGQ13278 110 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 SMIM7Q9BQ49 75 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 OSTCQ9NRP0 149 aa8.57□□□□□ -1.04
PTPRE-203ENST00000442830 NUP35Q8NFH5 326 aa8.56□□□□□ -1.04
PTPRE-203ENST00000442830 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
PTPRE-203ENST00000442830 TIMM21Q9BVV7 248 aa8.56□□□□□ -1.04
PTPRE-203ENST00000442830 CEBPGP53567 150 aa8.55□□□□□ -1.04
PTPRE-203ENST00000442830 SUMO2P61956 95 aaKnown RBP8.55□□□□□ -1.04
PTPRE-203ENST00000442830 GAGE2BQ13066 116 aa8.55□□□□□ -1.04
PTPRE-203ENST00000442830 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
PTPRE-203ENST00000442830 LINC01551Q86U37 167 aa8.55□□□□□ -1.04
PTPRE-203ENST00000442830 LINC00526Q96FQ7 95 aa8.55□□□□□ -1.04
PTPRE-203ENST00000442830 EIF5A2Q9GZV4 153 aaKnown RBP8.55□□□□□ -1.04
PTPRE-203ENST00000442830 AMN1Q8IY45 258 aa8.54□□□□□ -1.04
PTPRE-203ENST00000442830 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
PTPRE-203ENST00000442830 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
PTPRE-203ENST00000442830 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
PTPRE-203ENST00000442830 MT-ND6P03923 174 aa8.53□□□□□ -1.04
PTPRE-203ENST00000442830 TRAV13-1A0A0B4J241 112 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 A0A1B0GW15 77 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 LINC00862A6NCI5 91 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 ALKAL2Q6UX46 152 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
PTPRE-203ENST00000442830 GAS8-AS1O95177 125 aa8.51□□□□□ -1.05
PTPRE-203ENST00000442830 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
PTPRE-203ENST00000442830 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
PTPRE-203ENST00000442830 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
PTPRE-203ENST00000442830 FAM74A3Q4VXF1 159 aa8.51□□□□□ -1.05
PTPRE-203ENST00000442830 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
PTPRE-203ENST00000442830 AKAP14Q86UN6 197 aa8.51□□□□□ -1.05
PTPRE-203ENST00000442830 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.5□□□□□ -1.05
PTPRE-203ENST00000442830 NRACQ8N912 160 aa8.5□□□□□ -1.05
PTPRE-203ENST00000442830 MRPL35Q9NZE8 188 aaKnown RBP8.5□□□□□ -1.05
PTPRE-203ENST00000442830 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
PTPRE-203ENST00000442830 V9GYV3 84 aa8.5□□□□□ -1.05
PTPRE-203ENST00000442830 TRBV24-1A0A075B6N3 115 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 S100A8P05109 93 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 ODF1Q14990 250 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 FAM104BQ5XKR9 115 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 DIRC1Q969H9 104 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
PTPRE-203ENST00000442830 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
PTPRE-203ENST00000442830 NDUFA1O15239 70 aa8.48□□□□□ -1.05
PTPRE-203ENST00000442830 TMEM241Q24JQ0 296 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms