RNA–Protein interactions for RNA: ENST00000440919.1

SATB2-204, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best)

Gene SATB2, Length 2,166 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-204ENST00000440919 DEFB114Q30KQ6 69 aa12.72□□□□□ -0.37
SATB2-204ENST00000440919 GEMIN7Q9H840 131 aaKnown RBP12.72□□□□□ -0.37
SATB2-204ENST00000440919 TEX29Q8N6K0 151 aa12.71□□□□□ -0.37
SATB2-204ENST00000440919 TMEM262E9PQX1 116 aa12.71□□□□□ -0.37
SATB2-204ENST00000440919 KHDC1LQ5JSQ8 128 aa12.71□□□□□ -0.37
SATB2-204ENST00000440919 CDKN2A-AS1Q9UH64 79 aa12.71□□□□□ -0.37
SATB2-204ENST00000440919 ICOSQ9Y6W8 199 aa12.71□□□□□ -0.37
SATB2-204ENST00000440919 IGLV5-45A0A087WSX0 123 aa12.7□□□□□ -0.38
SATB2-204ENST00000440919 NBPF19A0A087WUL8 3843 aa12.7□□□□□ -0.38
SATB2-204ENST00000440919 NPC2P61916 151 aa12.7□□□□□ -0.38
SATB2-204ENST00000440919 RNF183Q96D59 192 aa12.7□□□□□ -0.38
SATB2-204ENST00000440919 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
SATB2-204ENST00000440919 TIMM17BO60830 172 aa12.69□□□□□ -0.38
SATB2-204ENST00000440919 TIRAPP58753 221 aa12.69□□□□□ -0.38
SATB2-204ENST00000440919 HIST2H2BDQ6DRA6 164 aa12.69□□□□□ -0.38
SATB2-204ENST00000440919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.69□□□□□ -0.38
SATB2-204ENST00000440919 NTN5Q8WTR8 489 aaPredicted RBP12.69□□□□□ -0.38
SATB2-204ENST00000440919 Q6ZSV7 163 aa12.69□□□□□ -0.38
SATB2-204ENST00000440919 YAE1D1Q9NRH1 226 aa12.68□□□□□ -0.38
SATB2-204ENST00000440919 ZNF469Q96JG9 3925 aaPredicted RBP12.68□□□□□ -0.38
SATB2-204ENST00000440919 NDUFA1O15239 70 aa12.67□□□□□ -0.38
SATB2-204ENST00000440919 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
SATB2-204ENST00000440919 CLUHP3Q96NS8 147 aa12.67□□□□□ -0.38
SATB2-204ENST00000440919 XCL2Q9UBD3 114 aa12.67□□□□□ -0.38
SATB2-204ENST00000440919 ODF3L2Q3SX64 289 aa12.67□□□□□ -0.38
SATB2-204ENST00000440919 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
SATB2-204ENST00000440919 RPL13AP40429 203 aaKnown RBP12.66□□□□□ -0.38
SATB2-204ENST00000440919 IL17DQ8TAD2 202 aa12.66□□□□□ -0.38
SATB2-204ENST00000440919 IFITM1P13164 125 aa12.66□□□□□ -0.38
SATB2-204ENST00000440919 COX6A2Q02221 97 aa12.66□□□□□ -0.38
SATB2-204ENST00000440919 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
SATB2-204ENST00000440919 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
SATB2-204ENST00000440919 DAND5Q8N907 189 aa12.65□□□□□ -0.38
SATB2-204ENST00000440919 TEX49A0A1B0GTD5 131 aa12.64□□□□□ -0.39
SATB2-204ENST00000440919 COX6CP09669 75 aa12.64□□□□□ -0.39
SATB2-204ENST00000440919 IGLV5-39A0A0G2JS06 123 aa12.64□□□□□ -0.39
SATB2-204ENST00000440919 TMEM86BQ8N661 226 aa12.64□□□□□ -0.39
SATB2-204ENST00000440919 H7C423 109 aa12.63□□□□□ -0.39
SATB2-204ENST00000440919 LINC00694P0DN24 101 aa12.63□□□□□ -0.39
SATB2-204ENST00000440919 HERVK_113P63121 156 aa12.63□□□□□ -0.39
SATB2-204ENST00000440919 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
SATB2-204ENST00000440919 STHQ8IWL8 128 aa12.63□□□□□ -0.39
SATB2-204ENST00000440919 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 C2orf82Q6UX34 121 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 CLEC2BQ92478 149 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 CITED1Q99966 193 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 LST1O00453 97 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 FAM19A3Q7Z5A8 133 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
SATB2-204ENST00000440919 ITPR3Q14573 2671 aa12.61□□□□□ -0.39
SATB2-204ENST00000440919 H3BT86 120 aa12.61□□□□□ -0.39
SATB2-204ENST00000440919 Q9H8V8 135 aa12.61□□□□□ -0.39
SATB2-204ENST00000440919 TRAV25A0A0B4J276 109 aa12.6□□□□□ -0.39
SATB2-204ENST00000440919 CIRBPQ14011 172 aaKnown RBP12.6□□□□□ -0.39
SATB2-204ENST00000440919 NDUFA7O95182 113 aa12.6□□□□□ -0.39
SATB2-204ENST00000440919 NTM-AS1Q6ZSK4 140 aa12.6□□□□□ -0.39
SATB2-204ENST00000440919 CITED2Q99967 270 aaPredicted RBP12.6□□□□□ -0.39
SATB2-204ENST00000440919 CSDC2Q9Y534 153 aaKnown RBP12.6□□□□□ -0.39
SATB2-204ENST00000440919 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
SATB2-204ENST00000440919 TRBV10-1A0A0K0K1A3 114 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 SMIM1B2RUZ4 78 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 K7EQD1 137 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 RPL36AP83881 106 aaKnown RBP12.59□□□□□ -0.39
SATB2-204ENST00000440919 LINC00308Q8TCZ7 52 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 RPL36ALQ969Q0 106 aaKnown RBP12.59□□□□□ -0.39
SATB2-204ENST00000440919 PDZD2O15018 2839 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 CUBNO60494 3623 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 Q6ZTI0 123 aa12.59□□□□□ -0.39
SATB2-204ENST00000440919 DAZ2Q13117 558 aaKnown RBP12.58□□□□□ -0.4
SATB2-204ENST00000440919 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
SATB2-204ENST00000440919 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
SATB2-204ENST00000440919 TLN2Q9Y4G6 2542 aa12.58□□□□□ -0.4
SATB2-204ENST00000440919 WNK1Q9H4A3 2382 aa12.58□□□□□ -0.4
SATB2-204ENST00000440919 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
SATB2-204ENST00000440919 TRAV26-1A0A087WT03 109 aa12.57□□□□□ -0.4
SATB2-204ENST00000440919 KRTAP1-1Q07627 177 aa12.57□□□□□ -0.4
SATB2-204ENST00000440919 ZNF625Q96I27 306 aaPredicted RBP12.57□□□□□ -0.4
SATB2-204ENST00000440919 TRAV13-1A0A0B4J241 112 aa12.56□□□□□ -0.4
SATB2-204ENST00000440919 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
SATB2-204ENST00000440919 CDC42SE2Q9NRR3 84 aa12.56□□□□□ -0.4
SATB2-204ENST00000440919 DNAJC9-AS1A6NH13 148 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 CRLF1O75462 422 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 SNCGO76070 127 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 C11orf44Q8N8P7 122 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 CCDC168Q8NDH2 2452 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 NF1P21359 2839 aa12.55□□□□□ -0.4
SATB2-204ENST00000440919 A0A1W2PRX2 142 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 F5H768 121 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 SOSTDC1Q6X4U4 206 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 A0A0U1RRA0 63 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 GAGE12JA6NER3 117 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 CCL24O00175 119 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 GAGE4Q13068 117 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 GAGE5Q13069 117 aa12.54□□□□□ -0.4
SATB2-204ENST00000440919 FLNAP21333 2647 aaKnown RBP12.53□□□□□ -0.4
SATB2-204ENST00000440919 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.4
SATB2-204ENST00000440919 PRIMA1Q86XR5 153 aa12.52□□□□□ -0.4
SATB2-204ENST00000440919 ANAPC13Q9BS18 74 aa12.52□□□□□ -0.4
SATB2-204ENST00000440919 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
SATB2-204ENST00000440919 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms