RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 IQGAP1P46940 1657 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 TRBV7-3A0A075B6L6 115 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 TRAV22A0A0B4J277 110 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 IGHV1-18A0A0C4DH31 117 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 MYMXA0A1B0GTQ4 84 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 LOC285095A0A1B0GVY8 99 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 A0A1B0GWA3 101 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 C2orf70A6NJV1 201 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 FAM223BA6NKX1 122 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 E7EUB6 86 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 F8WEM9 126 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 MGST1P10620 155 aaKnown RBP1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 MIFP14174 115 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 Q5VV11 94 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 Q6JHZ5 121 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 SFTA2Q6UW10 78 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 PROK2Q9HC23 129 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 GNG13Q9P2W3 67 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 MINOS1-NBL1R4GNA1 71 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 GBF1Q92538 1859 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 MRC1P22897 1456 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 CPS1P31327 1500 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 ATP7AQ04656 1500 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 ABCC8Q09428 1581 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 SVILO95425 2214 aa1.81□□□□□ -2.12
LSM1P1-201ENST00000438629 KDM6BO15054 1643 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 NRXN3Q9Y4C0 1643 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 KIAA1549Q9HCM3 1950 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 TRBV25-1A0A075B6N4 114 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 TMSB15BA0A087X1C1 80 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 SDHAF1A6NFY7 115 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 TFF1P04155 84 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 BAALC-AS2P0C853 105 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 EDDM3BP56851 147 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 PLGLAQ15195 96 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 DEFB134Q4QY38 66 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 IFI27L1Q96BM0 104 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 R4GN34 69 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 NHSL1Q5SYE7 1610 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 SCN7AQ01118 1682 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 GCC2Q8IWJ2 1684 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 TIAM2Q8IVF5 1701 aa1.8□□□□□ -2.12
LSM1P1-201ENST00000438629 SHANK1Q9Y566 2161 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 A0A087WSZ3 146 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 IGLV3-32A0A0A0MS00 114 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 TEX49A0A1B0GTD5 131 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 A0A1W2PNN7 141 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 CEBPZOSA8MTT3 80 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 H3BVH4 76 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 COX6CP09669 75 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 ZNF818PQ6ZRF7 136 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 C20orf166-AS1Q96NR2 134 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 KIF21BO75037 1637 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 LY75O60449 1722 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 QSER1Q2KHR3 1735 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 RICTORQ6R327 1708 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 PAPPA2Q9BXP8 1791 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 COL11A1P12107 1806 aaPredicted RBP1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 DOCK11Q5JSL3 2073 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 ZNF407Q9C0G0 2248 aa1.79□□□□□ -2.12
LSM1P1-201ENST00000438629 UBR3Q6ZT12 1888 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 TULP4Q9NRJ4 1543 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 TMEM30CPA0ZSE6 113 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 CHKB-CPT1BH3BT56 60 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 ATP5EP2Q5VTU8 51 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 NCBP2-AS2Q69YL0 99 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 NDUFA11Q86Y39 141 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 SMIM4Q8WVI0 70 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 PPP1R1CQ8WVI7 109 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 LIMD2Q9BT23 127 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 PSENENQ9NZ42 101 aa1.78□□□□□ -2.12
LSM1P1-201ENST00000438629 SIP14410 1827 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 TRAV23DV6A0A075B6W5 121 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 TRAV12-3A0A0B4J271 114 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 CXorf51AA0A1B0GTR3 108 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 PCNX2A6NKB5 2137 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 ZNF815PA8K554 130 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 TMEM14DPA8MWL7 114 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 ERC2-IT1O76042 136 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 HRES1P13985 223 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 SPINT3P49223 89 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 MIR22HGQ0VDD5 57 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 ATXN8Q156A1 80 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 DEFB113Q30KQ7 82 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 C10orf128Q5T292 105 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 HCP5Q6MZN7 132 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 CLECL1Q8IZS7 167 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 Q8TAT8 98 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 TMEM254Q8TBM7 123 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 Q9BRP9 147 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 NMES1Q9C002 83 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 SCN3AQ9NY46 2000 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 ANKRD36A6QL64 1941 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 SHPRHQ149N8 1683 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 LRP6O75581 1613 aa1.77□□□□□ -2.13
LSM1P1-201ENST00000438629 MUC4Q99102 2169 aa1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 COL5A1P20908 1838 aaPredicted RBP1.76□□□□□ -2.13
LSM1P1-201ENST00000438629 IGLV10-54A0A075B6I4 117 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms