RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 NDUFA7O95182 113 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 A0A0B4J2C4 111 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 TRBV10-1A0A0K0K1A3 114 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 MTURNQ8N3F0 131 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 VSIG2Q96IQ7 327 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 FAM110AQ9BQ89 295 aa13.34□□□□□ -0.27
CLK1-205ENST00000434813 TRAV4A0A0B4J268 109 aa13.33□□□□□ -0.28
CLK1-205ENST00000434813 ETDBQ3ZM63 59 aa13.33□□□□□ -0.28
CLK1-205ENST00000434813 K7EQD1 137 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 Q6ZTI0 123 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 MUSTN1Q8IVN3 82 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 LITAFQ99732 161 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 IGLV5-45A0A087WSX0 123 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 EIF4EBP3O60516 100 aaPredicted RBP13.32□□□□□ -0.28
CLK1-205ENST00000434813 IGLV1-51P01701 117 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 GIG44P09565 113 aaPredicted RBP13.32□□□□□ -0.28
CLK1-205ENST00000434813 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 NDUFA12Q9UI09 145 aa13.32□□□□□ -0.28
CLK1-205ENST00000434813 TRBV20-1A0A075B6N2 111 aa13.31□□□□□ -0.28
CLK1-205ENST00000434813 PSMB2P49721 201 aa13.31□□□□□ -0.28
CLK1-205ENST00000434813 RPL36AP83881 106 aaKnown RBP13.31□□□□□ -0.28
CLK1-205ENST00000434813 RPL36ALQ969Q0 106 aaKnown RBP13.31□□□□□ -0.28
CLK1-205ENST00000434813 GEMIN7Q9H840 131 aaKnown RBP13.31□□□□□ -0.28
CLK1-205ENST00000434813 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
CLK1-205ENST00000434813 J3QR89 54 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 SPINK8P0C7L1 97 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 TIRAPP58753 221 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 DAZ2Q13117 558 aaKnown RBP13.3□□□□□ -0.28
CLK1-205ENST00000434813 ADARB2-AS1A8MUL3 147 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 C19orf73Q9NVV2 129 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 WNK1Q9H4A3 2382 aa13.3□□□□□ -0.28
CLK1-205ENST00000434813 ZFAND6Q6FIF0 208 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 DAZ4Q86SG3 579 aaKnown RBP13.29□□□□□ -0.28
CLK1-205ENST00000434813 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 SPANXDQ9BXN6 97 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 DAZ3Q9NR90 486 aaKnown RBP13.29□□□□□ -0.28
CLK1-205ENST00000434813 SPANXCQ9NY87 97 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 IGHV3-33P01772 117 aa13.29□□□□□ -0.28
CLK1-205ENST00000434813 SMCPP49901 116 aaPredicted RBP13.29□□□□□ -0.28
CLK1-205ENST00000434813 TCL1BO95988 128 aa13.28□□□□□ -0.28
CLK1-205ENST00000434813 ATP6V0E2Q8NHE4 81 aa13.28□□□□□ -0.28
CLK1-205ENST00000434813 WFDC10AQ9H1F0 79 aa13.28□□□□□ -0.28
CLK1-205ENST00000434813 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.28
CLK1-205ENST00000434813 PLAC8L1A1L4L8 177 aa13.27□□□□□ -0.28
CLK1-205ENST00000434813 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.28
CLK1-205ENST00000434813 CDKN2A-AS1Q9UH64 79 aa13.27□□□□□ -0.28
CLK1-205ENST00000434813 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.28
CLK1-205ENST00000434813 FAM19A3Q7Z5A8 133 aa13.26□□□□□ -0.29
CLK1-205ENST00000434813 C1QTNF4Q9BXJ3 329 aa13.26□□□□□ -0.29
CLK1-205ENST00000434813 A8MZ25 164 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 LINC00694P0DN24 101 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 MIAQ16674 131 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 SBSPONQ8IVN8 264 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 ERG28Q9UKR5 140 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 HERVK_113P63121 156 aa13.25□□□□□ -0.29
CLK1-205ENST00000434813 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.25□□□□□ -0.29
CLK1-205ENST00000434813 TEP1Q99973 2627 aaKnown RBP13.24□□□□□ -0.29
CLK1-205ENST00000434813 TIMM17BO60830 172 aa13.24□□□□□ -0.29
CLK1-205ENST00000434813 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
CLK1-205ENST00000434813 ADAMTSL4-AS1Q5T5F5 129 aa13.24□□□□□ -0.29
CLK1-205ENST00000434813 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 CSNK1G2-AS1Q8NCQ2 148 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 NSD1Q96L73 2696 aaPredicted RBP13.23□□□□□ -0.29
CLK1-205ENST00000434813 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 NDUFA1O15239 70 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 CIDEAO60543 219 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 SCGB1C2P0DMR2 95 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 SMAGPQ0VAQ4 97 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 GAGE4Q13068 117 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 GAGE5Q13069 117 aa13.23□□□□□ -0.29
CLK1-205ENST00000434813 IGLV5-39A0A0G2JS06 123 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 COX6A2Q02221 97 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 CRLF1O75462 422 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 RNF183Q96D59 192 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
CLK1-205ENST00000434813 PRSS2P07478 247 aa13.21□□□□□ -0.29
CLK1-205ENST00000434813 INSL3P51460 131 aa13.21□□□□□ -0.29
CLK1-205ENST00000434813 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 GAGE7O76087 117 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 FOXI1Q12951 378 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 SPATA25Q9BR10 227 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 CDC42SE2Q9NRR3 84 aa13.2□□□□□ -0.3
CLK1-205ENST00000434813 H7C2G1 150 aa13.19□□□□□ -0.3
CLK1-205ENST00000434813 Q1RN00 199 aa13.19□□□□□ -0.3
CLK1-205ENST00000434813 TEN1Q86WV5 123 aa13.19□□□□□ -0.3
CLK1-205ENST00000434813 IFITM1P13164 125 aa13.18□□□□□ -0.3
CLK1-205ENST00000434813 TMEM243Q9BU79 118 aa13.18□□□□□ -0.3
CLK1-205ENST00000434813 TRBV30A0A0K0K1B3 111 aa13.18□□□□□ -0.3
CLK1-205ENST00000434813 GAGE12HA6NDE8 117 aa13.18□□□□□ -0.3
CLK1-205ENST00000434813 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
CLK1-205ENST00000434813 TRAV13-1A0A0B4J241 112 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms