RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 MAPKAPK5-AS1Q8N8E1 139 aa13.32□□□□□ -0.28
CSNK1E-207ENST00000430335 OR5A1Q8NGJ0 315 aa13.32□□□□□ -0.28
CSNK1E-207ENST00000430335 K7EMI3 77 aa13.31□□□□□ -0.28
CSNK1E-207ENST00000430335 ALKBH7Q9BT30 221 aaPredicted RBP13.31□□□□□ -0.28
CSNK1E-207ENST00000430335 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
CSNK1E-207ENST00000430335 NXT2Q9NPJ8 142 aaKnown RBP13.31□□□□□ -0.28
CSNK1E-207ENST00000430335 UBE2D4Q9Y2X8 147 aa13.31□□□□□ -0.28
CSNK1E-207ENST00000430335 KRTAP26-1Q6PEX3 210 aa13.3□□□□□ -0.28
CSNK1E-207ENST00000430335 SPATA12Q7Z6I5 190 aa13.3□□□□□ -0.28
CSNK1E-207ENST00000430335 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
CSNK1E-207ENST00000430335 TRAPPC1Q9Y5R8 145 aa13.3□□□□□ -0.28
CSNK1E-207ENST00000430335 LRP1BQ9NZR2 4599 aa13.29□□□□□ -0.28
CSNK1E-207ENST00000430335 DGAT2L7PQ6IED9 249 aa13.29□□□□□ -0.28
CSNK1E-207ENST00000430335 CBLN2Q8IUK8 224 aa13.29□□□□□ -0.28
CSNK1E-207ENST00000430335 KRTAP10-2P60368 255 aa13.28□□□□□ -0.28
CSNK1E-207ENST00000430335 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
CSNK1E-207ENST00000430335 IFI27P40305 119 aaPredicted RBP13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 WFDC2Q14508 124 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 ORMDL2Q53FV1 153 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 Q8N814 137 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 BAALCQ8WXS3 180 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 SPANXA1Q9NS26 97 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 PGPEP1Q9NXJ5 209 aa13.27□□□□□ -0.29
CSNK1E-207ENST00000430335 IGLV10-54A0A075B6I4 117 aa13.26□□□□□ -0.29
CSNK1E-207ENST00000430335 CDPF1Q6NVV7 123 aa13.25□□□□□ -0.29
CSNK1E-207ENST00000430335 IGKV3OR2-268A0A0C4DH90 116 aa13.24□□□□□ -0.29
CSNK1E-207ENST00000430335 PRSS3P2Q8NHM4 247 aa13.24□□□□□ -0.29
CSNK1E-207ENST00000430335 NTN5Q8WTR8 489 aaPredicted RBP13.24□□□□□ -0.29
CSNK1E-207ENST00000430335 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
CSNK1E-207ENST00000430335 LINC01546A6NGU7 62 aa13.23□□□□□ -0.29
CSNK1E-207ENST00000430335 LECT2O14960 151 aa13.23□□□□□ -0.29
CSNK1E-207ENST00000430335 MRPS36P82909 103 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-207ENST00000430335 Q6ZUT4 128 aa13.23□□□□□ -0.29
CSNK1E-207ENST00000430335 LINC00959A0A1B0GUT2 108 aa13.22□□□□□ -0.29
CSNK1E-207ENST00000430335 C16orf90A8MZG2 172 aa13.22□□□□□ -0.29
CSNK1E-207ENST00000430335 G0S2P27469 103 aa13.22□□□□□ -0.29
CSNK1E-207ENST00000430335 CHCHD10Q8WYQ3 142 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-207ENST00000430335 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
CSNK1E-207ENST00000430335 C14orf177Q52M58 125 aa13.21□□□□□ -0.29
CSNK1E-207ENST00000430335 C2orf66Q6UXQ4 117 aa13.21□□□□□ -0.29
CSNK1E-207ENST00000430335 FAM104AQ969W3 186 aa13.21□□□□□ -0.29
CSNK1E-207ENST00000430335 GAGE12HA6NDE8 117 aa13.2□□□□□ -0.3
CSNK1E-207ENST00000430335 CCL25O15444 150 aa13.2□□□□□ -0.3
CSNK1E-207ENST00000430335 SS18Q15532 418 aa13.2□□□□□ -0.3
CSNK1E-207ENST00000430335 USP17L23D6RBM5 183 aa13.19□□□□□ -0.3
CSNK1E-207ENST00000430335 RNASE13Q5GAN3 156 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-207ENST00000430335 C18orf32Q8TCD1 76 aa13.19□□□□□ -0.3
CSNK1E-207ENST00000430335 C1orf196B1AJZ1 125 aa13.18□□□□□ -0.3
CSNK1E-207ENST00000430335 NPSP0C0P6 89 aa13.18□□□□□ -0.3
CSNK1E-207ENST00000430335 FA2HQ7L5A8 372 aa13.18□□□□□ -0.3
CSNK1E-207ENST00000430335 IGLV4-3A0A075B6K6 122 aa13.17□□□□□ -0.3
CSNK1E-207ENST00000430335 FUSP35637 526 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSNK1E-207ENST00000430335 FOXI1Q12951 378 aa13.17□□□□□ -0.3
CSNK1E-207ENST00000430335 TOMM6Q96B49 74 aa13.17□□□□□ -0.3
CSNK1E-207ENST00000430335 OPRPNQ99935 248 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-207ENST00000430335 IGLV5-52A0A0A0MRZ9 124 aa13.16□□□□□ -0.3
CSNK1E-207ENST00000430335 LINC01549A6NIU2 74 aa13.16□□□□□ -0.3
CSNK1E-207ENST00000430335 COLCA2A8K830 154 aa13.16□□□□□ -0.3
CSNK1E-207ENST00000430335 XCL1P47992 114 aa13.16□□□□□ -0.3
CSNK1E-207ENST00000430335 TMEM141Q96I45 108 aa13.16□□□□□ -0.3
CSNK1E-207ENST00000430335 TRAV13-1A0A0B4J241 112 aa13.15□□□□□ -0.3
CSNK1E-207ENST00000430335 IGIPA6NJ69 53 aa13.15□□□□□ -0.3
CSNK1E-207ENST00000430335 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
CSNK1E-207ENST00000430335 DNAH8Q96JB1 4490 aa13.14□□□□□ -0.31
CSNK1E-207ENST00000430335 TIMM17AQ99595 171 aa13.14□□□□□ -0.31
CSNK1E-207ENST00000430335 AP5S1Q9NUS5 200 aa13.14□□□□□ -0.31
CSNK1E-207ENST00000430335 APOBP04114 4563 aaKnown RBP13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 LINC00614P0C842 121 aa13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 RAB5BP61020 215 aa13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 CFAP161Q6P656 301 aa13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 URB1-AS1Q96HZ7 61 aa13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 KIAA1109Q2LD37 5005 aa13.13□□□□□ -0.31
CSNK1E-207ENST00000430335 IFITM10A6NMD0 228 aa13.12□□□□□ -0.31
CSNK1E-207ENST00000430335 PRSS1P07477 247 aa13.12□□□□□ -0.31
CSNK1E-207ENST00000430335 GCSHP23434 173 aa13.12□□□□□ -0.31
CSNK1E-207ENST00000430335 Q6ZN92 141 aa13.12□□□□□ -0.31
CSNK1E-207ENST00000430335 RYR1P21817 5038 aa13.12□□□□□ -0.31
CSNK1E-207ENST00000430335 SCO1O75880 301 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 TRGC2P03986 189 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 ERASQ7Z444 233 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 AMELXQ99217 191 aa13.11□□□□□ -0.31
CSNK1E-207ENST00000430335 C15orf56Q8N910 161 aa13.1□□□□□ -0.31
CSNK1E-207ENST00000430335 SCGB3A1Q96QR1 104 aa13.09□□□□□ -0.31
CSNK1E-207ENST00000430335 C2orf88Q9BSF0 95 aa13.09□□□□□ -0.31
CSNK1E-207ENST00000430335 VCX2Q9H322 139 aa13.09□□□□□ -0.31
CSNK1E-207ENST00000430335 hDV102S1A0JD36 115 aa13.08□□□□□ -0.32
CSNK1E-207ENST00000430335 KRTAP10-1P60331 282 aa13.08□□□□□ -0.32
CSNK1E-207ENST00000430335 LINC00173Q6ZV60 143 aa13.08□□□□□ -0.32
CSNK1E-207ENST00000430335 A0A096LNJ9 63 aa13.07□□□□□ -0.32
CSNK1E-207ENST00000430335 GVQW2A0A096LPI5 108 aaPredicted RBP13.07□□□□□ -0.32
CSNK1E-207ENST00000430335 IGHV1-58A0A0C4DH39 117 aa13.07□□□□□ -0.32
CSNK1E-207ENST00000430335 COX7A2LO14548 114 aa13.07□□□□□ -0.32
CSNK1E-207ENST00000430335 S100A1P23297 94 aa13.06□□□□□ -0.32
CSNK1E-207ENST00000430335 UBE2D1P51668 147 aa13.06□□□□□ -0.32
CSNK1E-207ENST00000430335 CNBPP62633 177 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-207ENST00000430335 CHCHD1Q96BP2 118 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms