RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PRO1933Q9H354 126 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 NPVFQ9HCQ7 196 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 MANBALQ9NQG1 85 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 NDUFA4L2Q9NRX3 87 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 SCP2D1Q9UJQ7 156 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 SHANK2Q9UPX8 1470 aa1.02□□□□□ -2.25
HMGB1P9-201ENST00000429856 MUC6Q6W4X9 2439 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 ITSN2Q9NZM3 1697 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 KIAA0556O60303 1618 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 TARBP1Q13395 1621 aaKnown RBP1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 KIF14Q15058 1648 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 PLEKHH2Q8IVE3 1493 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 PXDNQ92626 1479 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 CLIP1P30622 1438 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 ANKRD17O75179 2603 aaKnown RBP1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 TRAV22A0A0B4J277 110 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 CHKB-CPT1BH3BT56 60 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 SPAG11BQ08648 103 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 KRTAP21-3Q3LHN1 58 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 SPAG11AQ6PDA7 123 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 FAM167A-AS1Q96KT0 104 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 Q96NJ1 140 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 DYNLRB1Q9NP97 96 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 TMEM14BQ9NUH8 114 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 LENEPQ9Y5L5 61 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 DOPEY1Q5JWR5 2465 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 RGPD4Q7Z3J3 1758 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 EPG5Q9HCE0 2579 aa1.01□□□□□ -2.25
HMGB1P9-201ENST00000429856 COL4A6Q14031 1691 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 KIF21BO75037 1637 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 PRDM15P57071 1507 aaPredicted RBP1□□□□□ -2.25
HMGB1P9-201ENST00000429856 ZFHX3Q15911 3703 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 MRC1P22897 1456 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 CCDC18Q5T9S5 1454 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 HMGN4O00479 90 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 UBE2D3P61077 147 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 UBE2D2P62837 147 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 SFTA2Q6UW10 78 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 C10orf99Q6UWK7 81 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 LINC00575Q6W349 94 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 Q6ZSA8 131 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 Q8N6K4 173 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 WFDC6Q9BQY6 131 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 BPESC1Q9GZL8 116 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 ZNF236Q9UL36 1845 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 MYO5CQ9NQX4 1742 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 MARF1Q9Y4F3 1742 aaKnown RBP1□□□□□ -2.25
HMGB1P9-201ENST00000429856 KDM5AP29375 1690 aaKnown RBP1□□□□□ -2.25
HMGB1P9-201ENST00000429856 PREX1Q8TCU6 1659 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 F5P12259 2224 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 EYSQ5T1H1 3165 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 NWD1Q149M9 1564 aa1□□□□□ -2.25
HMGB1P9-201ENST00000429856 TEP1Q99973 2627 aaKnown RBP1□□□□□ -2.25
HMGB1P9-201ENST00000429856 EHBP1L1Q8N3D4 1523 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 ABCC2Q92887 1545 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 FANCAO15360 1455 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 CEP162Q5TB80 1403 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 PDCD11Q14690 1871 aaKnown RBP0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 COL6A3P12111 3177 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 LAMA2P24043 3122 aaKnown RBP0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 MYO7AQ13402 2215 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 MON2Q7Z3U7 1717 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 TRGV1A0A0A0MS02 117 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 ATOX1O00244 68 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 SFT2D2O95562 160 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 FAUP35544 74 aaKnown RBP0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 CCL18P55774 89 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 PYY3Q5JQD4 70 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 MYO7BQ6PIF6 2116 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 PLAC4Q8WY50 150 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 CDC42SE2Q9NRR3 84 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 FAIMQ9NVQ4 179 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 UQCR10Q9UDW1 63 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 PRO1854Q9UHT4 67 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 DIP2BQ9P265 1576 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 CHD6Q8TD26 2715 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 LRRC7Q96NW7 1537 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 KIAA0586Q9BVV6 1533 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 UGGT2Q9NYU1 1516 aa0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 SETD2Q9BYW2 2564 aaPredicted RBP0.99□□□□□ -2.25
HMGB1P9-201ENST00000429856 FASNP49327 2511 aaKnown RBP0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 RGPD3A6NKT7 1758 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 SUPT6HQ7KZ85 1726 aaKnown RBP0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 BDP1A6H8Y1 2624 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 PREX2Q70Z35 1606 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 TRBV7-7A0A0K0K1E9 115 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 C10orf142B7Z368 130 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 LY6G6CO95867 125 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 APOC3P02656 99 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 ASIPP42127 132 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 KRTAP10-4P60372 401 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 SERP2Q8N6R1 65 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 R4GMQ9 66 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 V9GYH0 126 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 KNTC1P50748 2209 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 ARHGEF5Q12774 1597 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 SAMD9Q5K651 1589 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 PTPN13Q12923 2485 aa0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 ANKRD11Q6UB99 2663 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P9-201ENST00000429856 CNTRLQ7Z7A1 2325 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms