RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 TMA7Q9Y2S6 64 aaKnown RBP8.25□□□□□ -1.09
HLA-F-219ENST00000429294 TWIST1Q15672 202 aa8.24□□□□□ -1.09
HLA-F-219ENST00000429294 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
HLA-F-219ENST00000429294 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
HLA-F-219ENST00000429294 RNF213Q63HN8 5207 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 GVQW2A0A096LPI5 108 aaPredicted RBP8.23□□□□□ -1.09
HLA-F-219ENST00000429294 H7C423 109 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 NCR2O95944 276 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 SPINK6Q6UWN8 80 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 ANAPC16Q96DE5 110 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
HLA-F-219ENST00000429294 TNXBP22105 4242 aa8.22□□□□□ -1.09
HLA-F-219ENST00000429294 A0A0J9YXV3 536 aa8.22□□□□□ -1.09
HLA-F-219ENST00000429294 COLCA2A8K830 154 aa8.22□□□□□ -1.09
HLA-F-219ENST00000429294 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
HLA-F-219ENST00000429294 APCSP02743 223 aa8.22□□□□□ -1.09
HLA-F-219ENST00000429294 CTRLP40313 264 aa8.21□□□□□ -1.1
HLA-F-219ENST00000429294 GATD1Q8NB37 220 aa8.21□□□□□ -1.1
HLA-F-219ENST00000429294 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
HLA-F-219ENST00000429294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.2□□□□□ -1.1
HLA-F-219ENST00000429294 A0A096LNI7 61 aa8.2□□□□□ -1.1
HLA-F-219ENST00000429294 IGKV2-29A2NJV5 120 aaPredicted RBP8.2□□□□□ -1.1
HLA-F-219ENST00000429294 FGF6P10767 208 aa8.2□□□□□ -1.1
HLA-F-219ENST00000429294 ZNF25P17030 456 aaPredicted RBP8.2□□□□□ -1.1
HLA-F-219ENST00000429294 RPL23P62829 140 aaKnown RBP8.2□□□□□ -1.1
HLA-F-219ENST00000429294 Q6ZRP5 223 aa8.2□□□□□ -1.1
HLA-F-219ENST00000429294 IMMP2LQ96T52 175 aa8.2□□□□□ -1.1
HLA-F-219ENST00000429294 CNFNQ9BYD5 112 aa8.2□□□□□ -1.1
HLA-F-219ENST00000429294 TRAV26-2A0A0B4J265 109 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 RAB5AP20339 215 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 S100PP25815 95 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 XCL1P47992 114 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 RAB5BP61020 215 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 ADIRFQ15847 76 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 NUDT10Q8NFP7 164 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 OR5A1Q8NGJ0 315 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 NUDT11Q96G61 164 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 CARD19Q96LW7 228 aa8.19□□□□□ -1.1
HLA-F-219ENST00000429294 TRBV24-1A0A075B6N3 115 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 SDHAF1A6NFY7 115 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 C1orf196B1AJZ1 125 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 ZNF561-AS1K7EIQ3 104 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 FOXI1Q12951 378 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 RPL39LQ96EH5 51 aaKnown RBP8.18□□□□□ -1.1
HLA-F-219ENST00000429294 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
HLA-F-219ENST00000429294 RPP21Q9H633 154 aaKnown RBP8.18□□□□□ -1.1
HLA-F-219ENST00000429294 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 I3L3M4 83 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 CCL25O15444 150 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 PMCHP20382 165 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 KRTAP10-8P60410 259 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 SS18Q15532 418 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 ISOC2Q96AB3 205 aa8.17□□□□□ -1.1
HLA-F-219ENST00000429294 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
HLA-F-219ENST00000429294 SYCNQ0VAF6 134 aa8.16□□□□□ -1.1
HLA-F-219ENST00000429294 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
HLA-F-219ENST00000429294 LOC105371267A0A1B0GV96 52 aa8.15□□□□□ -1.1
HLA-F-219ENST00000429294 LINC00526Q96FQ7 95 aa8.15□□□□□ -1.1
HLA-F-219ENST00000429294 MRAP2Q96G30 205 aa8.15□□□□□ -1.1
HLA-F-219ENST00000429294 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
HLA-F-219ENST00000429294 SRSF9Q13242 221 aaKnown RBP eCLIP8.14□□□□□ -1.11
HLA-F-219ENST00000429294 ODF1Q14990 250 aa8.14□□□□□ -1.11
HLA-F-219ENST00000429294 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
HLA-F-219ENST00000429294 BORCS7Q96B45 105 aa8.14□□□□□ -1.11
HLA-F-219ENST00000429294 ST20Q9HBF5 79 aa8.14□□□□□ -1.11
HLA-F-219ENST00000429294 LOC107984640A0A0U1RRK4 108 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 FAM231BA6NCW3 169 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 MALP21145 153 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 CAMPP49913 170 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 OCC1Q8TAD7 63 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 OSTCQ9NRP0 149 aa8.13□□□□□ -1.11
HLA-F-219ENST00000429294 TRBV6-5A0A0K0K1A5 114 aa8.12□□□□□ -1.11
HLA-F-219ENST00000429294 A8MWL6 223 aa8.12□□□□□ -1.11
HLA-F-219ENST00000429294 GATCO43716 136 aaKnown RBP8.12□□□□□ -1.11
HLA-F-219ENST00000429294 PTTG1IPP53801 180 aa8.12□□□□□ -1.11
HLA-F-219ENST00000429294 FOXA3P55318 350 aaPredicted RBP8.12□□□□□ -1.11
HLA-F-219ENST00000429294 SMAGPQ0VAQ4 97 aa8.12□□□□□ -1.11
HLA-F-219ENST00000429294 FAM231DQ6ZW35 169 aa8.12□□□□□ -1.11
HLA-F-219ENST00000429294 K7EN84 100 aa8.11□□□□□ -1.11
HLA-F-219ENST00000429294 ESDP10768 282 aa8.11□□□□□ -1.11
HLA-F-219ENST00000429294 COX19Q49B96 90 aa8.11□□□□□ -1.11
HLA-F-219ENST00000429294 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
HLA-F-219ENST00000429294 CDC42SE2Q9NRR3 84 aa8.11□□□□□ -1.11
HLA-F-219ENST00000429294 IGLV4-69A0A075B6H9 119 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 COX7A2LO14548 114 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 TSHBP01222 138 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 MT-ND6P03923 174 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 S100A6P06703 90 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 MRPL52Q86TS9 123 aaKnown RBP8.1□□□□□ -1.11
HLA-F-219ENST00000429294 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
HLA-F-219ENST00000429294 TGIF2-C20orf24A0A0A6YYL0 155 aa8.09□□□□□ -1.11
HLA-F-219ENST00000429294 GAS8-AS1O95177 125 aa8.08□□□□□ -1.12
HLA-F-219ENST00000429294 APOMO95445 188 aa8.08□□□□□ -1.12
HLA-F-219ENST00000429294 FCER1GP30273 86 aa8.08□□□□□ -1.12
HLA-F-219ENST00000429294 TRBV27A0A0K0K1C4 114 aa8.07□□□□□ -1.12
HLA-F-219ENST00000429294 A0A1B0GUT8 65 aa8.07□□□□□ -1.12
HLA-F-219ENST00000429294 VCYO14598 125 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms