RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-205ENST00000426681 COX19Q49B96 90 aa15.44■□□□□ 0.06
PDGFA-205ENST00000426681 TMEM18Q96B42 140 aa15.44■□□□□ 0.06
PDGFA-205ENST00000426681 CDC42SE2Q9NRR3 84 aa15.44■□□□□ 0.06
PDGFA-205ENST00000426681 KIAA1109Q2LD37 5005 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 IGLV5-52A0A0A0MRZ9 124 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 TIMM21Q9BVV7 248 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 MAP1LC3AQ9H492 121 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 UBE2D4Q9Y2X8 147 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 DNAH5Q8TE73 4624 aa15.43■□□□□ 0.06
PDGFA-205ENST00000426681 C14orf177Q52M58 125 aa15.42■□□□□ 0.06
PDGFA-205ENST00000426681 ZNF664Q8N3J9 261 aa15.42■□□□□ 0.06
PDGFA-205ENST00000426681 LRP1BQ9NZR2 4599 aa15.41■□□□□ 0.06
PDGFA-205ENST00000426681 CDK2AP2O75956 126 aa15.41■□□□□ 0.06
PDGFA-205ENST00000426681 RAB5AP20339 215 aa15.41■□□□□ 0.06
PDGFA-205ENST00000426681 GCSHP23434 173 aa15.41■□□□□ 0.06
PDGFA-205ENST00000426681 DGAT2L7PQ6IED9 249 aa15.41■□□□□ 0.06
PDGFA-205ENST00000426681 IGKV3OR2-268A0A0C4DH90 116 aa15.4■□□□□ 0.06
PDGFA-205ENST00000426681 USP17L23D6RBM5 183 aa15.4■□□□□ 0.06
PDGFA-205ENST00000426681 Q8N8P6 123 aa15.4■□□□□ 0.06
PDGFA-205ENST00000426681 LOC389332A0A1B0GUA5 103 aa15.39■□□□□ 0.05
PDGFA-205ENST00000426681 MT-ND6P03923 174 aa15.39■□□□□ 0.05
PDGFA-205ENST00000426681 KRTAP10-1P60331 282 aa15.38■□□□□ 0.05
PDGFA-205ENST00000426681 KIAA1644Q3SXP7 199 aa15.38■□□□□ 0.05
PDGFA-205ENST00000426681 CHCHD10Q8WYQ3 142 aaPredicted RBP15.38■□□□□ 0.05
PDGFA-205ENST00000426681 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.37■□□□□ 0.05
PDGFA-205ENST00000426681 LINC00959A0A1B0GUT2 108 aa15.37■□□□□ 0.05
PDGFA-205ENST00000426681 RPL39P62891 51 aaKnown RBP15.37■□□□□ 0.05
PDGFA-205ENST00000426681 SLC7A5P1Q8MH63 180 aa15.37■□□□□ 0.05
PDGFA-205ENST00000426681 GAGE12HA6NDE8 117 aa15.36■□□□□ 0.05
PDGFA-205ENST00000426681 K7EMI3 77 aa15.36■□□□□ 0.05
PDGFA-205ENST00000426681 NXT2Q9NPJ8 142 aaKnown RBP15.36■□□□□ 0.05
PDGFA-205ENST00000426681 SPANXA1Q9NS26 97 aa15.36■□□□□ 0.05
PDGFA-205ENST00000426681 TGIF2-C20orf24A0A0A6YYL0 155 aa15.35■□□□□ 0.05
PDGFA-205ENST00000426681 PRSS1P07477 247 aa15.34■□□□□ 0.05
PDGFA-205ENST00000426681 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
PDGFA-205ENST00000426681 CCL25O15444 150 aa15.33■□□□□ 0.04
PDGFA-205ENST00000426681 SS18Q15532 418 aa15.33■□□□□ 0.04
PDGFA-205ENST00000426681 FAM104AQ969W3 186 aa15.33■□□□□ 0.04
PDGFA-205ENST00000426681 ALKBH7Q9BT30 221 aaPredicted RBP15.33■□□□□ 0.04
PDGFA-205ENST00000426681 HERC2O95714 4834 aa15.33■□□□□ 0.04
PDGFA-205ENST00000426681 MRPS36P82909 103 aaKnown RBP15.32■□□□□ 0.04
PDGFA-205ENST00000426681 ORMDL2Q53FV1 153 aa15.32■□□□□ 0.04
PDGFA-205ENST00000426681 Q6ZUT4 128 aa15.32■□□□□ 0.04
PDGFA-205ENST00000426681 PYGO1Q9Y3Y4 419 aa15.32■□□□□ 0.04
PDGFA-205ENST00000426681 IFI27P40305 119 aaPredicted RBP15.31■□□□□ 0.04
PDGFA-205ENST00000426681 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
PDGFA-205ENST00000426681 FOXI1Q12951 378 aa15.31■□□□□ 0.04
PDGFA-205ENST00000426681 RYR1P21817 5038 aa15.31■□□□□ 0.04
PDGFA-205ENST00000426681 C1orf196B1AJZ1 125 aa15.3■□□□□ 0.04
PDGFA-205ENST00000426681 XCL1P47992 114 aa15.3■□□□□ 0.04
PDGFA-205ENST00000426681 CFAP161Q6P656 301 aa15.3■□□□□ 0.04
PDGFA-205ENST00000426681 YPEL4Q96NS1 127 aa15.3■□□□□ 0.04
PDGFA-205ENST00000426681 RNASE13Q5GAN3 156 aaKnown RBP15.29■□□□□ 0.04
PDGFA-205ENST00000426681 CD164L2Q6UWJ8 174 aa15.29■□□□□ 0.04
PDGFA-205ENST00000426681 CYSLTR1Q9Y271 337 aa15.28■□□□□ 0.04
PDGFA-205ENST00000426681 TRAPPC1Q9Y5R8 145 aa15.28■□□□□ 0.04
PDGFA-205ENST00000426681 C2orf66Q6UXQ4 117 aa15.27■□□□□ 0.04
PDGFA-205ENST00000426681 C15orf56Q8N910 161 aa15.27■□□□□ 0.04
PDGFA-205ENST00000426681 OPRPNQ99935 248 aaPredicted RBP15.27■□□□□ 0.04
PDGFA-205ENST00000426681 APOBP04114 4563 aaKnown RBP15.26■□□□□ 0.03
PDGFA-205ENST00000426681 hDV102S1A0JD36 115 aa15.26■□□□□ 0.03
PDGFA-205ENST00000426681 LINC01546A6NGU7 62 aa15.26■□□□□ 0.03
PDGFA-205ENST00000426681 G0S2P27469 103 aa15.26■□□□□ 0.03
PDGFA-205ENST00000426681 PRSS3P2Q8NHM4 247 aa15.26■□□□□ 0.03
PDGFA-205ENST00000426681 TRAV13-1A0A0B4J241 112 aa15.25■□□□□ 0.03
PDGFA-205ENST00000426681 XGP55808 180 aa15.25■□□□□ 0.03
PDGFA-205ENST00000426681 SMCO4Q9NRQ5 59 aa15.25■□□□□ 0.03
PDGFA-205ENST00000426681 CNBPP62633 177 aaKnown RBP15.24■□□□□ 0.03
PDGFA-205ENST00000426681 LINC01620Q4KN68 170 aa15.24■□□□□ 0.03
PDGFA-205ENST00000426681 HSPG2P98160 4391 aa15.23■□□□□ 0.03
PDGFA-205ENST00000426681 IGLV4-3A0A075B6K6 122 aa15.23■□□□□ 0.03
PDGFA-205ENST00000426681 NPSP0C0P6 89 aa15.23■□□□□ 0.03
PDGFA-205ENST00000426681 AP5S1Q9NUS5 200 aa15.23■□□□□ 0.03
PDGFA-205ENST00000426681 GVQW2A0A096LPI5 108 aaPredicted RBP15.22■□□□□ 0.03
PDGFA-205ENST00000426681 IGIPA6NJ69 53 aa15.22■□□□□ 0.03
PDGFA-205ENST00000426681 Q6ZSA8 131 aa15.22■□□□□ 0.03
PDGFA-205ENST00000426681 C9orf163Q8N9P6 203 aa15.22■□□□□ 0.03
PDGFA-205ENST00000426681 TMEM141Q96I45 108 aa15.22■□□□□ 0.03
PDGFA-205ENST00000426681 FAM30AQ9NZY2 134 aa15.22■□□□□ 0.03
PDGFA-205ENST00000426681 SLPIP03973 132 aa15.21■□□□□ 0.03
PDGFA-205ENST00000426681 CBLN2Q8IUK8 224 aa15.21■□□□□ 0.03
PDGFA-205ENST00000426681 IGHV1-58A0A0C4DH39 117 aa15.2■□□□□ 0.02
PDGFA-205ENST00000426681 IFITM10A6NMD0 228 aa15.2■□□□□ 0.02
PDGFA-205ENST00000426681 TOMM6Q96B49 74 aa15.2■□□□□ 0.02
PDGFA-205ENST00000426681 COX7A2LO14548 114 aa15.19■□□□□ 0.02
PDGFA-205ENST00000426681 HIGD2BQ4VC39 106 aa15.18■□□□□ 0.02
PDGFA-205ENST00000426681 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.17■□□□□ 0.02
PDGFA-205ENST00000426681 LINC01549A6NIU2 74 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 TEX43Q6ZNM6 134 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 FA2HQ7L5A8 372 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 C18orf32Q8TCD1 76 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 AMELXQ99217 191 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 TIMM17AQ99595 171 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 KRTAP17-1Q9BYP8 105 aa15.17■□□□□ 0.02
PDGFA-205ENST00000426681 IGHV3OR16-9A0A0B4J2B5 98 aa15.16■□□□□ 0.02
PDGFA-205ENST00000426681 Q6ZN92 141 aa15.16■□□□□ 0.02
PDGFA-205ENST00000426681 VCX2Q9H322 139 aa15.16■□□□□ 0.02
PDGFA-205ENST00000426681 MALP21145 153 aa15.15■□□□□ 0.02
PDGFA-205ENST00000426681 PAPPA-AS1Q5QFB9 102 aa15.15■□□□□ 0.02
PDGFA-205ENST00000426681 LINC00173Q6ZV60 143 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms