RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CNFNQ9BYD5 112 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 SMAD5-AS1Q9Y6J3 95 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 TNFRSF4P43489 277 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 C6orf223Q8N319 242 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 K7EIM0 57 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 CXCL10P02778 98 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 MSMPQ1L6U9 139 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 I3L2K1 104 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 SOCS3O14543 225 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 CD164Q04900 197 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 Q6JHZ5 121 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 VMO1Q7Z5L0 202 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 MRPL53Q96EL3 112 aaKnown RBP5.02□□□□□ -1.61
CNOT4-205ENST00000423368 Q9H8V8 135 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 RBM12B-AS1Q9P1G2 102 aa5.02□□□□□ -1.61
CNOT4-205ENST00000423368 SPANXDQ9BXN6 97 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 TRBV6-1A0A0K0K1D8 114 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 C19orf84I3L1E1 186 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 CCL4P13236 92 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 SUMO4Q6EEV6 95 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 GPHB5Q86YW7 130 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 C11orf44Q8N8P7 122 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 DCHS2Q6V1P9 2916 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 IGHV1-2P23083 117 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 UNQ9165/PRO28630Q6UXU0 137 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 CCL17Q92583 94 aa5.01□□□□□ -1.61
CNOT4-205ENST00000423368 JMJD1CQ15652 2540 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 VCYO14598 125 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 CGB3P0DN86 165 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 CGB7P0DN87 165 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
CNOT4-205ENST00000423368 ECSCRQ19T08 205 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
CNOT4-205ENST00000423368 TM2D3Q9BRN9 247 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 LMO7DNF2Z398 122 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 FOLR3P41439 243 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 TIMM17AQ99595 171 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 Q9UF83 564 aa5□□□□□ -1.61
CNOT4-205ENST00000423368 IGKV3OR2-268A0A0C4DH90 116 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 BLCAPP62952 87 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 LINC00308Q8TCZ7 52 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 SPRR3Q9UBC9 169 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 CSPG4Q6UVK1 2322 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 M0R1B8 84 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 APOC4P55056 127 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 ZNF833PQ6ZTB9 187 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 F8P00451 2351 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-205ENST00000423368 IGKV2-29A2NJV5 120 aaPredicted RBP4.99□□□□□ -1.61
CNOT4-205ENST00000423368 PPP1R17O96001 155 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 PDE6HQ13956 83 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 MRGPRG-AS1Q2M3A8 158 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 TMEM141Q96I45 108 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 TOMM7Q9P0U1 55 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 CDKN2A-AS1Q9UH64 79 aa4.99□□□□□ -1.61
CNOT4-205ENST00000423368 FN1P02751 2386 aaKnown RBP4.98□□□□□ -1.61
CNOT4-205ENST00000423368 GAFA1Q96PS6 74 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 MYO9AB2RTY4 2548 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 IGLV3-12A0A075B6K2 115 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 IGLV4-3A0A075B6K6 122 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 C10orf142B7Z368 130 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 LINC01565O15544 149 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 Q0VFX4 171 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 C15orf32Q32M92 178 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 C11orf72Q8NBR9 251 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 LINC01600Q96MT4 127 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 COL4A2P08572 1712 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 C5orf67F2Z3F1 127 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 PVRIGQ6DKI7 326 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 LYPD2Q6UXB3 125 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 PRSS33Q8NF86 280 aa4.98□□□□□ -1.61
CNOT4-205ENST00000423368 IGHV1-58A0A0C4DH39 117 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 Q8N9L7 120 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 FAM30AQ9NZY2 134 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 MIFP14174 115 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 BEAN1Q3B7T3 259 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 UBE2E2Q96LR5 201 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 UBL5Q9BZL1 73 aa4.97□□□□□ -1.61
CNOT4-205ENST00000423368 PROK1P58294 105 aa4.96□□□□□ -1.61
CNOT4-205ENST00000423368 VSIG2Q96IQ7 327 aa4.96□□□□□ -1.61
CNOT4-205ENST00000423368 BBC3Q96PG8 261 aaPredicted RBP4.96□□□□□ -1.61
CNOT4-205ENST00000423368 TTTY12Q9BZ98 90 aa4.96□□□□□ -1.61
CNOT4-205ENST00000423368 CRPP02741 224 aa4.96□□□□□ -1.62
CNOT4-205ENST00000423368 POLR2KP53803 58 aaKnown RBP4.96□□□□□ -1.62
CNOT4-205ENST00000423368 IGHV1-69DA0A0B4J2H0 117 aa4.96□□□□□ -1.62
CNOT4-205ENST00000423368 LINC01356Q8N9X3 169 aa4.96□□□□□ -1.62
CNOT4-205ENST00000423368 CR1P17927 2039 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 IGHV1-8P0DP01 117 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 ESRGQ1W209 222 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 Q8N3U1 123 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 PRM2P04554 102 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
CNOT4-205ENST00000423368 OTOGLQ3ZCN5 2332 aa4.94□□□□□ -1.62
CNOT4-205ENST00000423368 PLAC8L1A1L4L8 177 aa4.94□□□□□ -1.62
CNOT4-205ENST00000423368 EPM2AB3EWF7 344 aa4.94□□□□□ -1.62
CNOT4-205ENST00000423368 RNASE3P12724 160 aaKnown RBP4.94□□□□□ -1.62
CNOT4-205ENST00000423368 CFHR3Q02985 330 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms