RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 DEFB114Q30KQ6 69 aa12.58□□□□□ -0.4
SMG7-204ENST00000419169 DAND5Q8N907 189 aa12.58□□□□□ -0.4
SMG7-204ENST00000419169 TMEM101Q96IK0 257 aa12.58□□□□□ -0.4
SMG7-204ENST00000419169 CR1P17927 2039 aa12.58□□□□□ -0.4
SMG7-204ENST00000419169 NDUFA1O15239 70 aa12.57□□□□□ -0.4
SMG7-204ENST00000419169 IFITM1P13164 125 aa12.57□□□□□ -0.4
SMG7-204ENST00000419169 DGAT2L7PQ6IED9 249 aa12.57□□□□□ -0.4
SMG7-204ENST00000419169 LRRK2Q5S007 2527 aa12.57□□□□□ -0.4
SMG7-204ENST00000419169 CITED1Q99966 193 aa12.57□□□□□ -0.4
SMG7-204ENST00000419169 TRAV26-1A0A087WT03 109 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 H7C423 109 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 C2orf82Q6UX34 121 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 COX6A2Q02221 97 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 UBE2WQ96B02 151 aa12.56□□□□□ -0.4
SMG7-204ENST00000419169 CLEC2BQ92478 149 aa12.55□□□□□ -0.4
SMG7-204ENST00000419169 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
SMG7-204ENST00000419169 TEX29Q8N6K0 151 aa12.55□□□□□ -0.4
SMG7-204ENST00000419169 TEX15Q9BXT5 2789 aa12.55□□□□□ -0.4
SMG7-204ENST00000419169 H3BT86 120 aa12.54□□□□□ -0.4
SMG7-204ENST00000419169 LST1O00453 97 aa12.54□□□□□ -0.4
SMG7-204ENST00000419169 MYO9AB2RTY4 2548 aa12.54□□□□□ -0.4
SMG7-204ENST00000419169 HERVK_113P63121 156 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 LINC00242Q5T6M2 205 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 ZNF843Q8N446 348 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
SMG7-204ENST00000419169 PTPN13Q12923 2485 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 TRAV8-4A0A0B4J246 113 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 IGLV5-39A0A0G2JS06 123 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
SMG7-204ENST00000419169 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
SMG7-204ENST00000419169 ABCA12Q86UK0 2595 aa12.52□□□□□ -0.4
SMG7-204ENST00000419169 SNCGO76070 127 aa12.52□□□□□ -0.4
SMG7-204ENST00000419169 LINC00694P0DN24 101 aa12.52□□□□□ -0.4
SMG7-204ENST00000419169 CLUHP3Q96NS8 147 aa12.52□□□□□ -0.4
SMG7-204ENST00000419169 Q9H8V8 135 aa12.52□□□□□ -0.4
SMG7-204ENST00000419169 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 CRLF1O75462 422 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 C1orf158Q8N1D5 194 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 IL17DQ8TAD2 202 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 CITED2Q99967 270 aaPredicted RBP12.51□□□□□ -0.41
SMG7-204ENST00000419169 TRAV4A0A0B4J268 109 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 ANAPC13Q9BS18 74 aa12.51□□□□□ -0.41
SMG7-204ENST00000419169 STHQ8IWL8 128 aa12.5□□□□□ -0.41
SMG7-204ENST00000419169 NAV2Q8IVL1 2488 aa12.5□□□□□ -0.41
SMG7-204ENST00000419169 NDUFA7O95182 113 aa12.5□□□□□ -0.41
SMG7-204ENST00000419169 FAM19A3Q7Z5A8 133 aa12.5□□□□□ -0.41
SMG7-204ENST00000419169 ZNF625Q96I27 306 aaPredicted RBP12.5□□□□□ -0.41
SMG7-204ENST00000419169 A0A1W2PRX2 142 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 SMIM1B2RUZ4 78 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 GAGE2BQ13066 116 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 Q96MF0 132 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
SMG7-204ENST00000419169 ZNF469Q96JG9 3925 aaPredicted RBP12.49□□□□□ -0.41
SMG7-204ENST00000419169 RPL36AP83881 106 aaKnown RBP12.48□□□□□ -0.41
SMG7-204ENST00000419169 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
SMG7-204ENST00000419169 RPL36ALQ969Q0 106 aaKnown RBP12.48□□□□□ -0.41
SMG7-204ENST00000419169 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
SMG7-204ENST00000419169 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
SMG7-204ENST00000419169 K7EQD1 137 aa12.48□□□□□ -0.41
SMG7-204ENST00000419169 TRAV13-1A0A0B4J241 112 aa12.47□□□□□ -0.41
SMG7-204ENST00000419169 TRBV10-1A0A0K0K1A3 114 aa12.47□□□□□ -0.41
SMG7-204ENST00000419169 Q6ZTI0 123 aa12.47□□□□□ -0.41
SMG7-204ENST00000419169 DAZ2Q13117 558 aaKnown RBP12.46□□□□□ -0.41
SMG7-204ENST00000419169 DAZ4Q86SG3 579 aaKnown RBP12.46□□□□□ -0.41
SMG7-204ENST00000419169 DAZ3Q9NR90 486 aaKnown RBP12.46□□□□□ -0.41
SMG7-204ENST00000419169 AKAP9Q99996 3911 aa12.46□□□□□ -0.41
SMG7-204ENST00000419169 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.42
SMG7-204ENST00000419169 DEFB113Q30KQ7 82 aa12.46□□□□□ -0.42
SMG7-204ENST00000419169 C15orf53Q8NAA6 179 aa12.46□□□□□ -0.42
SMG7-204ENST00000419169 TLN2Q9Y4G6 2542 aa12.45□□□□□ -0.42
SMG7-204ENST00000419169 SOSTDC1Q6X4U4 206 aa12.45□□□□□ -0.42
SMG7-204ENST00000419169 DEFB121Q5J5C9 76 aa12.45□□□□□ -0.42
SMG7-204ENST00000419169 CDC42SE2Q9NRR3 84 aa12.45□□□□□ -0.42
SMG7-204ENST00000419169 Q6Q795 121 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 GAGE12JA6NER3 117 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 F5H768 121 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 NHLRC4P0CG21 123 aaPredicted RBP12.44□□□□□ -0.42
SMG7-204ENST00000419169 GAGE4Q13068 117 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 GAGE5Q13069 117 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 COPS9Q8WXC6 57 aa12.44□□□□□ -0.42
SMG7-204ENST00000419169 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
SMG7-204ENST00000419169 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
SMG7-204ENST00000419169 COX7A2LO14548 114 aa12.43□□□□□ -0.42
SMG7-204ENST00000419169 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
SMG7-204ENST00000419169 FAM240AA0A1B0GVK7 77 aa12.42□□□□□ -0.42
SMG7-204ENST00000419169 SONP18583 2426 aaKnown RBP12.42□□□□□ -0.42
SMG7-204ENST00000419169 SHISA2Q6UWI4 295 aa12.42□□□□□ -0.42
SMG7-204ENST00000419169 TTC32Q5I0X7 151 aa12.4□□□□□ -0.42
SMG7-204ENST00000419169 TMEM86BQ8N661 226 aa12.4□□□□□ -0.42
SMG7-204ENST00000419169 NOP10Q9NPE3 64 aaKnown RBP12.4□□□□□ -0.42
SMG7-204ENST00000419169 CCL24O00175 119 aa12.39□□□□□ -0.43
SMG7-204ENST00000419169 HERV-K104P63124 156 aa12.39□□□□□ -0.43
SMG7-204ENST00000419169 MRPL23Q16540 153 aaKnown RBP12.39□□□□□ -0.43
SMG7-204ENST00000419169 LRRC75A-AS1Q8N1F1 130 aa12.39□□□□□ -0.43
SMG7-204ENST00000419169 NF1P21359 2839 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms