RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
RFC1-203ENST00000418436 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
RFC1-203ENST00000418436 LRP1BQ9NZR2 4599 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 D6R8Y8 96 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 PHOX2AO14813 284 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 TNFRSF6BO95407 300 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 CRPP02741 224 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 WFDC2Q14508 124 aa6.95□□□□□ -1.3
RFC1-203ENST00000418436 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.94□□□□□ -1.3
RFC1-203ENST00000418436 TRAV9-1A0A075B6T8 112 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 IGKV2-29A2NJV5 120 aaPredicted RBP6.94□□□□□ -1.3
RFC1-203ENST00000418436 C7orf77A4D0Y5 90 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 REG3AQ06141 175 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 KRTAP26-1Q6PEX3 210 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 Q8N814 137 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 CLRN3Q8NCR9 226 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 C1orf43Q9BWL3 253 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
RFC1-203ENST00000418436 NPYP01303 97 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 FGF6P10767 208 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 ZNF25P17030 456 aaPredicted RBP6.93□□□□□ -1.3
RFC1-203ENST00000418436 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
RFC1-203ENST00000418436 RHEBQ15382 184 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 TMEM136Q6ZRR5 245 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 ORMDL3Q8N138 153 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 NTN5Q8WTR8 489 aaPredicted RBP6.93□□□□□ -1.3
RFC1-203ENST00000418436 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
RFC1-203ENST00000418436 TRAV8-4A0A0B4J246 113 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 C9orf118A6NHY6 69 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 PRSS47A8MTI9 375 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 AMMECR1LQ6DCA0 310 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 MRPL52Q86TS9 123 aaKnown RBP6.92□□□□□ -1.3
RFC1-203ENST00000418436 PRELID3AQ96N28 172 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 KIR2DL4Q99706 377 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 SMIM2Q9BVW6 85 aa6.92□□□□□ -1.3
RFC1-203ENST00000418436 LECT2O14960 151 aa6.91□□□□□ -1.3
RFC1-203ENST00000418436 TCAPO15273 167 aa6.91□□□□□ -1.3
RFC1-203ENST00000418436 FCER1GP30273 86 aa6.91□□□□□ -1.3
RFC1-203ENST00000418436 RNASEKQ6P5S7 137 aaKnown RBP6.91□□□□□ -1.3
RFC1-203ENST00000418436 LAMTOR2Q9Y2Q5 125 aa6.91□□□□□ -1.3
RFC1-203ENST00000418436 HERC2O95714 4834 aa6.9□□□□□ -1.3
RFC1-203ENST00000418436 CDK2AP2O75956 126 aa6.9□□□□□ -1.3
RFC1-203ENST00000418436 S100PP25815 95 aa6.9□□□□□ -1.3
RFC1-203ENST00000418436 RPS10P5Q9NQ39 176 aa6.9□□□□□ -1.3
RFC1-203ENST00000418436 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
RFC1-203ENST00000418436 APOBP04114 4563 aaKnown RBP6.89□□□□□ -1.31
RFC1-203ENST00000418436 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 IGLV5-52A0A0A0MRZ9 124 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 APOC3P02656 99 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 GCSHP23434 173 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 SVBPQ8N300 66 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 TIMM21Q9BVV7 248 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 GNB1LQ9BYB4 327 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 RYR1P21817 5038 aa6.89□□□□□ -1.31
RFC1-203ENST00000418436 SNAPINO95295 136 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 HLA-DQA1P01909 254 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 SMAGPQ0VAQ4 97 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 NDUFA5Q16718 116 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 TMEM18Q96B42 140 aa6.88□□□□□ -1.31
RFC1-203ENST00000418436 USP17L23D6RBM5 183 aa6.87□□□□□ -1.31
RFC1-203ENST00000418436 COX19Q49B96 90 aa6.87□□□□□ -1.31
RFC1-203ENST00000418436 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
RFC1-203ENST00000418436 MAP1LC3AQ9H492 121 aa6.87□□□□□ -1.31
RFC1-203ENST00000418436 HSPG2P98160 4391 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.86□□□□□ -1.31
RFC1-203ENST00000418436 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 LINC00959A0A1B0GUT2 108 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 Q8N8P6 123 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
RFC1-203ENST00000418436 FAM104AQ969W3 186 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 KRTAP3-1Q9BYR8 98 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 DNAH8Q96JB1 4490 aa6.86□□□□□ -1.31
RFC1-203ENST00000418436 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 K7EMI3 77 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 MT-ND6P03923 174 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 PRSS1P07477 247 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 RAB5AP20339 215 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
RFC1-203ENST00000418436 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 SPANXA1Q9NS26 97 aa6.85□□□□□ -1.31
RFC1-203ENST00000418436 TGIF2-C20orf24A0A0A6YYL0 155 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 CCL25O15444 150 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 XGP55808 180 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
RFC1-203ENST00000418436 FOXI1Q12951 378 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 SS18Q15532 418 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 Q6ZUT4 128 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 SLC7A5P1Q8MH63 180 aa6.84□□□□□ -1.31
RFC1-203ENST00000418436 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
RFC1-203ENST00000418436 NXT2Q9NPJ8 142 aaKnown RBP6.84□□□□□ -1.31
RFC1-203ENST00000418436 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms