RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 SERP2Q8N6R1 65 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 BET1LQ9NYM9 111 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 MLH3Q9UHC1 1453 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 CDK13Q14004 1512 aaKnown RBP1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 KDM5DQ9BY66 1539 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 DCAF1Q9Y4B6 1507 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 MYO3AQ8NEV4 1616 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 LRRIQ1Q96JM4 1722 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 EPG5Q9HCE0 2579 aa1.28□□□□□ -2.2
HMGB3P31-201ENST00000413333 HECTD1Q9ULT8 2610 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 SETD2Q9BYW2 2564 aaPredicted RBP1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 PTPN13Q12923 2485 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 CNTRLQ7Z7A1 2325 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 KNTC1P50748 2209 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 MYH4Q9Y623 1939 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 KIF20BQ96Q89 1820 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 FANCAO15360 1455 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 UACAQ9BZF9 1416 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 A0A087WTM6 91 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 TRAV22A0A0B4J277 110 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 NDUFC1O43677 76 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 NMBP08949 121 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 SSBP1Q04837 148 aaKnown RBP1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 Q6ZQY7 126 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 C5orf56Q8N8D9 126 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 COX7B2Q8TF08 81 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 TRGV9Q99603 122 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 C20orf78Q9BR46 151 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 CDC42SE2Q9NRR3 84 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 NDUFA4L2Q9NRX3 87 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 CACFD1Q9UGQ2 172 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 LENEPQ9Y5L5 61 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 PCNTO95613 3336 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 F5P12259 2224 aa1.27□□□□□ -2.21
HMGB3P31-201ENST00000413333 SCN7AQ01118 1682 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 KIF14Q15058 1648 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 MAP3K4Q9Y6R4 1608 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 BDP1A6H8Y1 2624 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 DIP2BQ9P265 1576 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 EPRSP07814 1512 aaKnown RBP1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 MRC1P22897 1456 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 RRBP1Q9P2E9 1410 aaKnown RBP1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 H7BZZ5 65 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 TDRG1Q3Y452 100 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 C6orf52Q5T4I8 152 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 MGST2Q99735 147 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 PRO1854Q9UHT4 67 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 CHD6Q8TD26 2715 aa1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 SUPT6HQ7KZ85 1726 aaKnown RBP1.26□□□□□ -2.21
HMGB3P31-201ENST00000413333 UNC13BO14795 1591 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 EHBP1L1Q8N3D4 1523 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 POLA1P09884 1462 aaPredicted RBP1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 ERVK-7P63135 1459 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 FASNP49327 2511 aaKnown RBP1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 TRBV30A0A0K0K1B3 111 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 A0A1W2PPM0 123 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 APOC3P02656 99 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 FAUP35544 74 aaKnown RBP1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 EDDM3BP56851 147 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 VMO1Q7Z5L0 202 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 LINC00208Q96KT6 92 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 BPESC1Q9GZL8 116 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 DYNLRB1Q9NP97 96 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 MANBALQ9NQG1 85 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 ABCA12Q86UK0 2595 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 HMGXB3Q12766 1538 aa1.25□□□□□ -2.21
HMGB3P31-201ENST00000413333 ATP10BO94823 1461 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 NLRP1Q9C000 1473 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 MYO7AQ13402 2215 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 PLIN4Q96Q06 1357 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 CHKB-CPT1BH3BT56 60 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 TRAPPC2P0DI81 140 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 TRAPPC2BP0DI82 140 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 KLKP1Q107X0 134 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 PEA15Q15121 130 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 PPP1R1CQ8WVI7 109 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 CCL19Q99731 98 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 CACNA1CQ13936 2221 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 BTAF1O14981 1849 aa1.24□□□□□ -2.21
HMGB3P31-201ENST00000413333 HMGN4O00479 90 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 PPP1R17O96001 155 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 CYB5AP00167 134 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 COX6CP09669 75 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 CCL18P55774 89 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 FAM74A4Q5TZK3 123 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 UQCR10Q9UDW1 63 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 COL6A3P12111 3177 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 NRXN1Q9ULB1 1477 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 PIEZO1Q92508 2521 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 IFT172Q9UG01 1749 aa1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 ASH1LQ9NR48 2969 aaKnown RBP1.23□□□□□ -2.21
HMGB3P31-201ENST00000413333 NAV3Q8IVL0 2385 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 DNMBPQ6XZF7 1577 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 TMEM14DPA8MWL7 114 aa1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 PRB3Q04118 309 aaPredicted RBP1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 S100A16Q96FQ6 103 aaKnown RBP1.22□□□□□ -2.21
HMGB3P31-201ENST00000413333 Q96NJ1 140 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms