RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 NRACQ8N912 160 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 TMEM167AQ8TBQ9 72 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 FMC1Q96HJ9 113 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 TRGV9Q99603 122 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 OCR1Q9BZK8 76 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 TMEM167BQ9NRX6 74 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF580Q9UK33 172 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 HHLA3Q9XRX5 114 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 PYGO1Q9Y3Y4 419 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 S4R3C0 116 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
SF3B1-202ENST00000409915 NOTCH3Q9UM47 2321 aa3.32□□□□□ -1.88
SF3B1-202ENST00000409915 TRAV2A0A0B4J234 112 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 RBAKDNA6NC62 111 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 J3QQQ9 107 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 LGALS9O00182 355 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 DPM2O94777 84 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 IGKV1-5P01602 117 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 TRBV12-3P01733 135 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 IGHV3-23P01764 117 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 IL4P05112 153 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 ACYP1P07311 99 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 CD7P09564 240 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 ARL14EPLP0DKL9 152 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 MGST1P10620 155 aaKnown RBP3.31□□□□□ -1.88
SF3B1-202ENST00000409915 PSMB2P49721 201 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 WT1-ASQ06250 92 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 CLEC19AQ6UXS0 136 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF493Q6ZR52 646 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 C5orf38Q86SI9 138 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF575Q86XF7 245 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 AMN1Q8IY45 258 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 C4orf3Q8WVX3 66 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 IFI27L1Q96BM0 104 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 KRTAP17-1Q9BYP8 105 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF492Q9P255 531 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 U3KQK5 164 aa3.31□□□□□ -1.88
SF3B1-202ENST00000409915 IGHV3-21A0A0B4J1V1 117 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 C8orf87E5RJ46 101 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 H3BP45 60 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 IGKCP01834 107 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 TRACP01848 142 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 C15orf32Q32M92 178 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 TMEM170BQ5T4T1 132 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 NOTCH2NLQ7Z3S9 236 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 CHCHD5Q9BSY4 110 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 UPK3BQ9BT76 320 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 SHANK2-AS3Q9BTD1 123 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 AGPAT4-IT1Q9H0P7 198 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 NDUFA4L2Q9NRX3 87 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 TMEM14BQ9NUH8 114 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 CACNG5Q9UF02 275 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 PKIGQ9Y2B9 76 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 AGRNO00468 2067 aa3.3□□□□□ -1.88
SF3B1-202ENST00000409915 IGLV11-55A0A075B6I3 123 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 SMIM26A0A096LP01 95 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 FAM236AA0A1B0GUQ0 79 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 FAM236BA0A1B0GV22 79 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 WI2-2373I1.2A0A1W2PRP0 233 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 RPL37AP8A6NKH3 93 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 FAM223BA6NKX1 122 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 H3BUA1 57 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 ATOX1O00244 68 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 TCL1BO95988 128 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 LTAP01374 205 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 IGHV3-48P01763 117 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 DEFA4P12838 97 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 REG3AQ06141 175 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 PMAIP1Q13794 54 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 FHL2Q14192 279 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 SPANXN5Q5MJ07 72 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 MORN5Q5VZ52 161 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 FAM223AQ8IWN6 122 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF414Q96IQ9 312 aa3.29□□□□□ -1.88
SF3B1-202ENST00000409915 IGLV4-3A0A075B6K6 122 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 IGKV2D-26A0A0A0MRZ7 120 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 IGHV3-16A0A0C4DH30 117 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 IGHV3-35A0A0C4DH35 117 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 HIGD1CA8MV81 97 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 SLC25A20O43772 301 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 SPINK4O60575 86 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 HBDP02042 147 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 IAPPP10997 89 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 ZNF138P52744 262 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 SYNJ2BPP57105 145 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 KRTAP10-11P60412 298 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 PRCDQ00LT1 54 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 ZC2HC1BQ5TFG8 222 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 LINC00643Q86TS7 51 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 EXOC3-AS1Q8N2X6 119 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 NKAPP1Q8N9T2 125 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 WFDC9Q8NEX5 89 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 USMG5Q96IX5 58 aa3.28□□□□□ -1.88
SF3B1-202ENST00000409915 F11RQ9Y624 299 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms