RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ICE1Q9Y2F5 2266 aa2.25□□□□□ -2.05
CUL3-204ENST00000409777 FASNP49327 2511 aaKnown RBP2.25□□□□□ -2.05
CUL3-204ENST00000409777 IGHV3OR16-12A0A075B7B8 117 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 SMIM1B2RUZ4 78 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 RPL28P46779 137 aaKnown RBP2.24□□□□□ -2.05
CUL3-204ENST00000409777 KLRB1Q12918 225 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 LINC00242Q5T6M2 205 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 Q6ZSV7 163 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 C10orf105Q8TEF2 133 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 NRGNQ92686 78 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 NCOR1O75376 2440 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 PRRC2CQ9Y520 2896 aaKnown RBP2.24□□□□□ -2.05
CUL3-204ENST00000409777 ABCA1O95477 2261 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 MAP1BP46821 2468 aaKnown RBP2.24□□□□□ -2.05
CUL3-204ENST00000409777 GCN1Q92616 2671 aaKnown RBP2.24□□□□□ -2.05
CUL3-204ENST00000409777 A0A096LNT2 108 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 UQCRQO14949 82 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 IGHV4-38-2P0DP08 117 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 SLURP1P55000 103 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
CUL3-204ENST00000409777 MEIG1Q5JSS6 88 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 LRRC75A-AS1Q8N1F1 130 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 Q8N2B8 174 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 UPK3BQ9BT76 320 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 Q9H8V8 135 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 NDUFA7O95182 113 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 LY6G6DO95868 133 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 LINC00694P0DN24 101 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 BLCAPP62952 87 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 HERVK_113P63121 156 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 COX6A2Q02221 97 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 DUX3Q96PT4 197 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 Q9UF83 564 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 LINC00527Q9UJ94 153 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 TACC2O95359 2948 aa2.24□□□□□ -2.05
CUL3-204ENST00000409777 PRRC2AP48634 2157 aaKnown RBP2.23□□□□□ -2.05
CUL3-204ENST00000409777 BOD1L1Q8NFC6 3051 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 ACACBO00763 2458 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 DMXL1Q9Y485 3027 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 TRAV12-2A0A075B6T6 113 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 IGHV3-11P01762 117 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 PROK1P58294 105 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 Q1RN00 199 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 FAM74A4Q5TZK3 123 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 Q6JHZ5 121 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 CEMP1Q6PRD7 247 aaPredicted RBP2.23□□□□□ -2.05
CUL3-204ENST00000409777 LYPD5Q6UWN5 251 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 FAM218AQ96MZ4 157 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 CHCHD5Q9BSY4 110 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 ANKRD11Q6UB99 2663 aaPredicted RBP2.23□□□□□ -2.05
CUL3-204ENST00000409777 CSMD1Q96PZ7 3565 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 ADGRG4Q8IZF6 3080 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 IGHV3-64A0A075B6Q5 118 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 IGHV4-61A0A0C4DH41 118 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 EPM2AB3EWF7 344 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 H3BUX3 64 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 COX7CP15954 63 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 UCNP55089 124 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 SPINK13Q1W4C9 94 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 OVOL2Q9BRP0 275 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 LRBAP50851 2863 aa2.23□□□□□ -2.05
CUL3-204ENST00000409777 ATMQ13315 3056 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 IGKV2-28A0A075B6P5 120 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 TRBV10-1A0A0K0K1A3 114 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 H7C2G1 150 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 IGKV2D-28P01615 120 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 INAFM2P0DMQ5 153 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 DAZ2Q13117 558 aaKnown RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 BRD3OSQ6XYD6 125 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 DAZ4Q86SG3 579 aaKnown RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 SMIM20Q8N5G0 67 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 UBE2E2Q96LR5 201 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 UBTD1Q9HAC8 227 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 DAZ3Q9NR90 486 aaKnown RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 APC2O95996 2303 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 FAM236AA0A1B0GUQ0 79 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 FAM236BA0A1B0GV22 79 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 SS18Q15532 418 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 NTM-AS1Q6ZSK4 140 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 Q96MF0 132 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 KRTAP4-11Q9BYQ6 195 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 ZNF702PQ9H963 129 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 CDC42SE2Q9NRR3 84 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 PKDREJQ9NTG1 2253 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 URB1O60287 2271 aaKnown RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 IGKV2-29A2NJV5 120 aaPredicted RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 DEFB104AQ8WTQ1 72 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 KLK5Q9Y337 293 aaPredicted RBP2.22□□□□□ -2.05
CUL3-204ENST00000409777 NAV2Q8IVL1 2488 aa2.22□□□□□ -2.05
CUL3-204ENST00000409777 ZFHX3Q15911 3703 aa2.21□□□□□ -2.05
CUL3-204ENST00000409777 MGAQ8IWI9 3026 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 TRAV13-2A0A0B4J235 113 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 C19orf84I3L1E1 186 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 J3QLI3 93 aa2.21□□□□□ -2.06
CUL3-204ENST00000409777 ATOX1O00244 68 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms