RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 Q6ZUT4 128 aa10.12□□□□□ -0.79
SNRNP27-202ENST00000409116 NFE4Q86UQ8 179 aa10.12□□□□□ -0.79
SNRNP27-202ENST00000409116 TIMM21Q9BVV7 248 aa10.12□□□□□ -0.79
SNRNP27-202ENST00000409116 CYSLTR1Q9Y271 337 aa10.12□□□□□ -0.79
SNRNP27-202ENST00000409116 LINC00614P0C842 121 aa10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 CDC42SE2Q9NRR3 84 aa10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 SPANXA1Q9NS26 97 aa10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
SNRNP27-202ENST00000409116 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
SNRNP27-202ENST00000409116 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
SNRNP27-202ENST00000409116 Q0VG73 95 aa10.1□□□□□ -0.79
SNRNP27-202ENST00000409116 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
SNRNP27-202ENST00000409116 CSDC2Q9Y534 153 aaKnown RBP10.1□□□□□ -0.79
SNRNP27-202ENST00000409116 RAB5BP61020 215 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 PMCHL1Q16048 86 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 MIAQ16674 131 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 DNAH11Q96DT5 4516 aa10.09□□□□□ -0.79
SNRNP27-202ENST00000409116 PKD1P98161 4303 aa10.08□□□□□ -0.8
SNRNP27-202ENST00000409116 TNP2Q05952 138 aa10.08□□□□□ -0.8
SNRNP27-202ENST00000409116 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
SNRNP27-202ENST00000409116 RMI2Q96E14 147 aa10.08□□□□□ -0.8
SNRNP27-202ENST00000409116 C1orf43Q9BWL3 253 aa10.08□□□□□ -0.8
SNRNP27-202ENST00000409116 IGLV4-3A0A075B6K6 122 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 PSCAO43653 123 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 G0S2P27469 103 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 A0A096LNJ9 63 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 PRSS29PA6NIE9 313 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BKO60814 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 SERF1AO75920 110 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BJP06899 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BOP23527 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BBP33778 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BDP58876 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BCP62807 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST2H2BEQ16778 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 MAPKAPK5-AS1Q8N8E1 139 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BHQ93079 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BNQ99877 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HIST1H2BMQ99879 126 aa10.07□□□□□ -0.8
SNRNP27-202ENST00000409116 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 LINC00959A0A1B0GUT2 108 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 LINC00310P59036 64 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 ZC2HC1BQ5TFG8 222 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 KRTAP26-1Q6PEX3 210 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 LINC00336Q6ZUF6 198 aa10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 CHCHD1Q96BP2 118 aaKnown RBP10.06□□□□□ -0.8
SNRNP27-202ENST00000409116 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
SNRNP27-202ENST00000409116 IFITM10A6NMD0 228 aa10.05□□□□□ -0.8
SNRNP27-202ENST00000409116 HBDP02042 147 aa10.05□□□□□ -0.8
SNRNP27-202ENST00000409116 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
SNRNP27-202ENST00000409116 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
SNRNP27-202ENST00000409116 LECT2O14960 151 aa10.04□□□□□ -0.8
SNRNP27-202ENST00000409116 XCL1P47992 114 aa10.04□□□□□ -0.8
SNRNP27-202ENST00000409116 ERASQ7Z444 233 aa10.04□□□□□ -0.8
SNRNP27-202ENST00000409116 CHCHD10Q8WYQ3 142 aaPredicted RBP10.04□□□□□ -0.8
SNRNP27-202ENST00000409116 TIMM17AQ99595 171 aa10.04□□□□□ -0.8
SNRNP27-202ENST00000409116 GAGE12HA6NDE8 117 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 C1orf196B1AJZ1 125 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 CCL25O15444 150 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 NUPR1O60356 82 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 HSBP1O75506 76 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 WFDC2Q14508 124 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 Q6ZN92 141 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 LINC00173Q6ZV60 143 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 FAM19A2Q8N3H0 131 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 BAALCQ8WXS3 180 aa10.03□□□□□ -0.8
SNRNP27-202ENST00000409116 A0A087WTM6 91 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 LRCOL1A6NCL2 159 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 LINC01549A6NIU2 74 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 SS18Q15532 418 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 PDZD11Q5EBL8 140 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 TEX43Q6ZNM6 134 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 VCX2Q9H322 139 aa10.02□□□□□ -0.81
SNRNP27-202ENST00000409116 NPSP0C0P6 89 aa10.01□□□□□ -0.81
SNRNP27-202ENST00000409116 AMELXQ99217 191 aa10.01□□□□□ -0.81
SNRNP27-202ENST00000409116 PKHD1P08F94 4074 aa10□□□□□ -0.81
SNRNP27-202ENST00000409116 FOXI1Q12951 378 aa10□□□□□ -0.81
SNRNP27-202ENST00000409116 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
SNRNP27-202ENST00000409116 C2orf88Q9BSF0 95 aa10□□□□□ -0.81
SNRNP27-202ENST00000409116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
SNRNP27-202ENST00000409116 A0A1B0GVY2 172 aa9.98□□□□□ -0.81
SNRNP27-202ENST00000409116 UBE2D1P51668 147 aa9.98□□□□□ -0.81
SNRNP27-202ENST00000409116 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
SNRNP27-202ENST00000409116 USP17L23D6RBM5 183 aa9.97□□□□□ -0.81
SNRNP27-202ENST00000409116 ATP5LO75964 103 aa9.97□□□□□ -0.81
SNRNP27-202ENST00000409116 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
SNRNP27-202ENST00000409116 NDUFA6P56556 154 aa9.97□□□□□ -0.81
SNRNP27-202ENST00000409116 EREGO14944 169 aa9.96□□□□□ -0.82
SNRNP27-202ENST00000409116 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms