RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 DEFB131AP59861 70 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 BLCAPP62952 87 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 Q6JHZ5 121 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 STHQ8IWL8 128 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 PRRC2AP48634 2157 aaKnown RBP4.39□□□□□ -1.71
HDAC9-203ENST00000406072 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 ZNF561-AS1K7EIQ3 104 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 C11orf21Q9P2W6 132 aa4.39□□□□□ -1.71
HDAC9-203ENST00000406072 IGLV4-3A0A075B6K6 122 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 SS18Q15532 418 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 SCXQ7RTU7 201 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 USMG5Q96IX5 58 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 NDUFC1O43677 76 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 XCL1P47992 114 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 LY6DQ14210 128 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 NDUFA4O00483 81 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 BRD3OSQ6XYD6 125 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 CNFNQ9BYD5 112 aa4.38□□□□□ -1.71
HDAC9-203ENST00000406072 MED14OSP0DP75 135 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 HTN3P15516 51 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 SAA4P35542 130 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 MRPS36P82909 103 aaKnown RBP4.37□□□□□ -1.71
HDAC9-203ENST00000406072 NREPQ16612 68 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 RUSC1-AS1Q66K80 236 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 DMXL1Q9Y485 3027 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 LRCOL1A6NCL2 159 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 GNLYP22749 145 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 SBSPONQ8IVN8 264 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 ZFHX2Q9C0A1 2572 aaPredicted RBP4.37□□□□□ -1.71
HDAC9-203ENST00000406072 POM121L12Q8N7R1 296 aa4.37□□□□□ -1.71
HDAC9-203ENST00000406072 IGHV4-28A0A0C4DH34 117 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 CDSNQ15517 529 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGHV7-4-1A0A0J9YVY3 117 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGIPA6NJ69 53 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 BRI3O95415 125 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
HDAC9-203ENST00000406072 CFHR3Q02985 330 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 AKAP13Q12802 2813 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGLV4-69A0A075B6H9 119 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGHV7-81A0A0B4J1V7 117 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 DSCR9P59020 149 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 FRYLO94915 3013 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 WDFY4Q6ZS81 3184 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 IGLV2-18A0A075B6J9 118 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 TRBV27A0A0K0K1C4 114 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 H3BUX3 64 aa4.36□□□□□ -1.71
HDAC9-203ENST00000406072 ABCA2Q9BZC7 2435 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 IGLV1-47P01700 117 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 POLR2KP53803 58 aaKnown RBP4.35□□□□□ -1.71
HDAC9-203ENST00000406072 SMAD5-AS1Q9Y6J3 95 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 CUL9Q8IWT3 2517 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 TMEM89A2RUT3 159 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 ADAMTSL4-AS1Q5T5F5 129 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 ZNF580Q9UK33 172 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 MIFP14174 115 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 FAM19A1Q7Z5A9 133 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 BBC3Q96PG8 261 aaPredicted RBP4.35□□□□□ -1.71
HDAC9-203ENST00000406072 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
HDAC9-203ENST00000406072 CCDC168Q8NDH2 2452 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 A0A0J9YX75 114 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 NDUFA1O15239 70 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 CLPSL2Q6UWE3 100 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 COX6B1P14854 86 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 HILS1P60008 231 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 PRR4Q16378 134 aa4.34□□□□□ -1.71
HDAC9-203ENST00000406072 FRYQ5TBA9 3013 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 IGHV4OR15-8A0A075B7B6 117 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 A0A087WW49 117 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 HOXB4P17483 251 aaPredicted RBP4.34□□□□□ -1.72
HDAC9-203ENST00000406072 KLK9Q2XQG4 91 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 ZFAND2AQ8N6M9 145 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 NPBQ8NG41 125 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 FAM19A4Q96LR4 140 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 TLN2Q9Y4G6 2542 aa4.34□□□□□ -1.72
HDAC9-203ENST00000406072 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 M0QY20 66 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 DEFB130BP0DP73 79 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 DEFB130AP0DP74 79 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 RMI2Q96E14 147 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 PDE6GP18545 87 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 GRNP28799 593 aaKnown RBP4.33□□□□□ -1.72
HDAC9-203ENST00000406072 MP68P56378 58 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 DEFB105AQ8NG35 78 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 SERTAD4-AS1Q5TG53 156 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 C9orf85Q96MD7 179 aa4.33□□□□□ -1.72
HDAC9-203ENST00000406072 TET2Q6N021 2002 aaPredicted RBP4.32□□□□□ -1.72
HDAC9-203ENST00000406072 FN1P02751 2386 aaKnown RBP4.32□□□□□ -1.72
HDAC9-203ENST00000406072 C19orf84I3L1E1 186 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 PLA2G2AP14555 144 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 EBI3Q14213 229 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 LINC00467Q9BRT7 94 aa4.32□□□□□ -1.72
HDAC9-203ENST00000406072 BPY2O14599 106 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms