RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GBF1Q92538 1859 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 PTPRSQ13332 1948 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 BCE1O60756 84 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 CAV3P56539 151 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 SSBP1Q04837 148 aaKnown RBP2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 KIAA2026Q5HYC2 2103 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 GNG13Q9P2W3 67 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 PRO1854Q9UHT4 67 aa2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P13-201ENST00000406019 ABCC8Q09428 1581 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 IGLV3-32A0A0A0MS00 114 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 TRBV10-3A0A0K0K1G6 114 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 A0A1B0GWA3 101 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 NNATQ16517 81 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q6JHZ5 121 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 FAM167A-AS1Q96KT0 104 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 CMC2Q9NRP2 79 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 IQGAP1P46940 1657 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 GREB1Q4ZG55 1949 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 FMN2Q9NZ56 1722 aa2.36□□□□□ -2.03
HMGB1P13-201ENST00000406019 FAM208AQ9UK61 1670 aaKnown RBP2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 NUMA1Q14980 2115 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 MRC1P22897 1456 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 MED13Q9UHV7 2174 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 TRBV7-3A0A075B6L6 115 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 TRBV25-1A0A075B6N4 114 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 TRAV7A0A075B6U4 112 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 IGKV3D-11A0A0A0MRZ8 115 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 TRBV10-2A0A0K0K1G8 114 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 K7EMI3 77 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 MSMBP08118 114 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 BAALC-AS2P0C853 105 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 ZNF826PQ6ZT77 177 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 NDUFA11Q86Y39 141 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 IFI27L1Q96BM0 104 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 CYP4F30PQ9H0H9 118 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 DYNLRB1Q9NP97 96 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 UBE2D4Q9Y2X8 147 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 LAMB2P55268 1798 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 ADGRB2O60241 1585 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 PLXNA2O75051 1894 aa2.35□□□□□ -2.03
HMGB1P13-201ENST00000406019 MALRD1Q5VYJ5 2156 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 DLG5Q8TDM6 1919 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 A6NIN4 97 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 CEBPZOSA8MTT3 80 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 PRH1P02810 166 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 MGST1P10620 155 aaKnown RBP2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 EDDM3BP56851 147 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 PLGLAQ15195 96 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 CASC2Q6XLA1 102 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 ZNF818PQ6ZRF7 136 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q8TAT8 98 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 Q9BRP9 147 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 NMES1Q9C002 83 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 CPAMD8Q8IZJ3 1885 aa2.34□□□□□ -2.03
HMGB1P13-201ENST00000406019 LRP6O75581 1613 aa2.34□□□□□ -2.04
HMGB1P13-201ENST00000406019 EML5Q05BV3 1969 aa2.34□□□□□ -2.04
HMGB1P13-201ENST00000406019 ZNF831Q5JPB2 1677 aa2.34□□□□□ -2.04
HMGB1P13-201ENST00000406019 AFDNP55196 1824 aaKnown RBP2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 KIAA1549LQ6ZVL6 1849 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 ATP7AQ04656 1500 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 A0A087WVE0 104 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 UBE2D1P51668 147 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 SMIM11AP58511 58 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 DEFB113Q30KQ7 82 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 CLECL1Q8IZS7 167 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 LINC00467Q9BRT7 94 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 CDC42SE2Q9NRR3 84 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 TMEM14BQ9NUH8 114 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 GCC2Q8IWJ2 1684 aa2.33□□□□□ -2.04
HMGB1P13-201ENST00000406019 PCNX2A6NKB5 2137 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 PARP4Q9UKK3 1724 aaKnown RBP2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 CXorf51AA0A1B0GTR3 108 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 CLPSL1A2RUU4 121 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 LINC01549A6NIU2 74 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 PPYP01298 95 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 HMGA1P17096 107 aaKnown RBP2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 IFI27P40305 119 aaPredicted RBP2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 PSMG4Q5JS54 123 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 CSAG1Q6PB30 78 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 BRD3OSQ6XYD6 125 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 SNURFQ9Y675 71 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 SLIT1O75093 1534 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 ERCC6L2Q5T890 1561 aa2.32□□□□□ -2.04
HMGB1P13-201ENST00000406019 DEPDC5O75140 1603 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 RREB1Q92766 1687 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 PIGBOS1A0A0B4J2F0 54 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 TMEM14DPA8MWL7 114 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 IGKV4-1P06312 121 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 C10orf128Q5T292 105 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 C2orf82Q6UX34 121 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 Q6ZS52 159 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 FDCSPQ8NFU4 85 aa2.31□□□□□ -2.04
HMGB1P13-201ENST00000406019 ZNF563Q8TA94 476 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms