RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
COL4A3BP-204ENST00000405807 I3L3M4 83 aa11.86□□□□□ -0.51
COL4A3BP-204ENST00000405807 A0A0J9YXY3 114 aa11.85□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGHG2P01859 326 aa11.85□□□□□ -0.51
COL4A3BP-204ENST00000405807 NACAE9PAV3 2078 aa11.85□□□□□ -0.51
COL4A3BP-204ENST00000405807 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
COL4A3BP-204ENST00000405807 K7EMT4 169 aa11.84□□□□□ -0.51
COL4A3BP-204ENST00000405807 SPTA1P02549 2419 aa11.84□□□□□ -0.51
COL4A3BP-204ENST00000405807 IGLV4-3A0A075B6K6 122 aa11.84□□□□□ -0.51
COL4A3BP-204ENST00000405807 ZFHX3Q15911 3703 aa11.84□□□□□ -0.51
COL4A3BP-204ENST00000405807 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
COL4A3BP-204ENST00000405807 BRD3OSQ6XYD6 125 aa11.83□□□□□ -0.52
COL4A3BP-204ENST00000405807 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
COL4A3BP-204ENST00000405807 SPTBN1Q01082 2364 aaKnown RBP11.83□□□□□ -0.52
COL4A3BP-204ENST00000405807 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
COL4A3BP-204ENST00000405807 LY6EQ16553 131 aa11.82□□□□□ -0.52
COL4A3BP-204ENST00000405807 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
COL4A3BP-204ENST00000405807 DAZ2Q13117 558 aaKnown RBP11.81□□□□□ -0.52
COL4A3BP-204ENST00000405807 DAND5Q8N907 189 aa11.81□□□□□ -0.52
COL4A3BP-204ENST00000405807 DAZ3Q9NR90 486 aaKnown RBP11.81□□□□□ -0.52
COL4A3BP-204ENST00000405807 IGLV1-40P01703 118 aa11.8□□□□□ -0.52
COL4A3BP-204ENST00000405807 ZNF580Q9UK33 172 aa11.8□□□□□ -0.52
COL4A3BP-204ENST00000405807 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
COL4A3BP-204ENST00000405807 STHQ8IWL8 128 aa11.8□□□□□ -0.52
COL4A3BP-204ENST00000405807 IGKV3-20P01619 116 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 LITAFQ99732 161 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 H7BZZ5 65 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 CD28P10747 220 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 XCL1P47992 114 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 Q6ZSV7 163 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 XCL2Q9UBD3 114 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 AKAP6Q13023 2319 aa11.79□□□□□ -0.52
COL4A3BP-204ENST00000405807 A6NDX4 124 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 TIMM17BO60830 172 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 BLCAPP62952 87 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 PTPRQQ9UMZ3 2332 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1BA6NDE4 496 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1EA6NEQ0 496 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 H3BUX3 64 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1DP0C7P1 496 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1A1P0DJD3 496 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1CP0DJD4 496 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 CELSR1Q9NYQ6 3014 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 CSMD2Q7Z408 3487 aa11.78□□□□□ -0.52
COL4A3BP-204ENST00000405807 IGHV1-58A0A0C4DH39 117 aa11.77□□□□□ -0.53
COL4A3BP-204ENST00000405807 A8MZ25 164 aa11.77□□□□□ -0.53
COL4A3BP-204ENST00000405807 NDUFA12Q9UI09 145 aa11.77□□□□□ -0.53
COL4A3BP-204ENST00000405807 GHRHP01286 108 aa11.76□□□□□ -0.53
COL4A3BP-204ENST00000405807 MIAQ16674 131 aa11.75□□□□□ -0.53
COL4A3BP-204ENST00000405807 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
COL4A3BP-204ENST00000405807 ADAMTSL4-AS1Q5T5F5 129 aa11.75□□□□□ -0.53
COL4A3BP-204ENST00000405807 Q6JHZ5 121 aa11.75□□□□□ -0.53
COL4A3BP-204ENST00000405807 VPS13CQ709C8 3753 aa11.75□□□□□ -0.53
COL4A3BP-204ENST00000405807 ATRXP46100 2492 aa11.74□□□□□ -0.53
COL4A3BP-204ENST00000405807 CCKP06307 115 aa11.74□□□□□ -0.53
COL4A3BP-204ENST00000405807 IGHV4-38-2P0DP08 117 aa11.74□□□□□ -0.53
COL4A3BP-204ENST00000405807 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
COL4A3BP-204ENST00000405807 TRBV7-6A0A0J9YX20 115 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 RBM3P98179 157 aaKnown RBP11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 CFHR3Q02985 330 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 COPS9Q8WXC6 57 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 FAM104AQ969W3 186 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 VSIG2Q96IQ7 327 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 C1orf158Q8N1D5 194 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 K7EQG2 157 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 PAX4O43316 350 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 UBE2D4Q9Y2X8 147 aa11.73□□□□□ -0.53
COL4A3BP-204ENST00000405807 Q6ZRU5 148 aa11.71□□□□□ -0.53
COL4A3BP-204ENST00000405807 MPLKIPQ8TAP9 179 aa11.71□□□□□ -0.53
COL4A3BP-204ENST00000405807 BAALC-AS2P0C853 105 aa11.71□□□□□ -0.54
COL4A3BP-204ENST00000405807 TMEM61Q8N0U2 210 aa11.71□□□□□ -0.54
COL4A3BP-204ENST00000405807 COL6A6A6NMZ7 2263 aa11.71□□□□□ -0.54
COL4A3BP-204ENST00000405807 PRR15Q8IV56 129 aa11.7□□□□□ -0.54
COL4A3BP-204ENST00000405807 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
COL4A3BP-204ENST00000405807 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
COL4A3BP-204ENST00000405807 IGHV4-61A0A0C4DH41 118 aa11.69□□□□□ -0.54
COL4A3BP-204ENST00000405807 DNAL4O96015 105 aa11.68□□□□□ -0.54
COL4A3BP-204ENST00000405807 HILS1P60008 231 aa11.68□□□□□ -0.54
COL4A3BP-204ENST00000405807 TRAV23DV6A0A075B6W5 121 aa11.68□□□□□ -0.54
COL4A3BP-204ENST00000405807 PROK1P58294 105 aa11.68□□□□□ -0.54
COL4A3BP-204ENST00000405807 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
COL4A3BP-204ENST00000405807 LINC00846Q9NV44 126 aa11.67□□□□□ -0.54
COL4A3BP-204ENST00000405807 C22orf24Q9Y442 160 aa11.67□□□□□ -0.54
COL4A3BP-204ENST00000405807 HTN1P15515 57 aa11.66□□□□□ -0.54
COL4A3BP-204ENST00000405807 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
COL4A3BP-204ENST00000405807 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
COL4A3BP-204ENST00000405807 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
COL4A3BP-204ENST00000405807 S100A7L2Q5SY68 101 aa11.64□□□□□ -0.55
COL4A3BP-204ENST00000405807 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
COL4A3BP-204ENST00000405807 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
COL4A3BP-204ENST00000405807 NDUFA1O15239 70 aa11.64□□□□□ -0.55
COL4A3BP-204ENST00000405807 SOSTDC1Q6X4U4 206 aa11.64□□□□□ -0.55
COL4A3BP-204ENST00000405807 ABCA2Q9BZC7 2435 aa11.63□□□□□ -0.55
COL4A3BP-204ENST00000405807 IGF2RP11717 2491 aa11.63□□□□□ -0.55
COL4A3BP-204ENST00000405807 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms