RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 C11orf21Q9P2W6 132 aa11.24□□□□□ -0.61
CHL1-202ENST00000397491 CENPFP49454 3210 aa11.24□□□□□ -0.61
CHL1-202ENST00000397491 SETD2Q9BYW2 2564 aaPredicted RBP11.23□□□□□ -0.61
CHL1-202ENST00000397491 UBE2D1P51668 147 aa11.23□□□□□ -0.61
CHL1-202ENST00000397491 IBA57-AS1B1ANH7 110 aa11.22□□□□□ -0.61
CHL1-202ENST00000397491 UBE2D3P61077 147 aa11.22□□□□□ -0.61
CHL1-202ENST00000397491 UBE2D2P62837 147 aa11.22□□□□□ -0.61
CHL1-202ENST00000397491 ZFAND3Q9H8U3 227 aa11.22□□□□□ -0.61
CHL1-202ENST00000397491 SMIM26A0A096LP01 95 aa11.21□□□□□ -0.61
CHL1-202ENST00000397491 KLK12Q9UKR0 248 aa11.21□□□□□ -0.61
CHL1-202ENST00000397491 PYGO1Q9Y3Y4 419 aa11.21□□□□□ -0.61
CHL1-202ENST00000397491 Q6JHZ5 121 aa11.21□□□□□ -0.62
CHL1-202ENST00000397491 TRBV6-5A0A0K0K1A5 114 aa11.21□□□□□ -0.62
CHL1-202ENST00000397491 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 TSHBP01222 138 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 SPTBN4Q9H254 2564 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 DAZAP2Q15038 168 aaPredicted RBP11.2□□□□□ -0.62
CHL1-202ENST00000397491 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 Q6ZTI0 123 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 KLK5Q9Y337 293 aaPredicted RBP11.2□□□□□ -0.62
CHL1-202ENST00000397491 A0A1W2PNU3 283 aaPredicted RBP11.2□□□□□ -0.62
CHL1-202ENST00000397491 PROK1P58294 105 aa11.2□□□□□ -0.62
CHL1-202ENST00000397491 TANC2Q9HCD6 1990 aa11.19□□□□□ -0.62
CHL1-202ENST00000397491 FAM222AQ5U5X8 452 aa11.19□□□□□ -0.62
CHL1-202ENST00000397491 LOC107984640A0A0U1RRK4 108 aa11.19□□□□□ -0.62
CHL1-202ENST00000397491 H0Y9J4 135 aa11.19□□□□□ -0.62
CHL1-202ENST00000397491 RNASE3P12724 160 aaKnown RBP11.19□□□□□ -0.62
CHL1-202ENST00000397491 POLR2KP53803 58 aaKnown RBP11.19□□□□□ -0.62
CHL1-202ENST00000397491 USP9XQ93008 2570 aaPredicted RBP11.18□□□□□ -0.62
CHL1-202ENST00000397491 A0A087WVE0 104 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 ODF3BA8MYP8 253 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 CNFNQ9BYD5 112 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 ANKRD11Q6UB99 2663 aaPredicted RBP11.18□□□□□ -0.62
CHL1-202ENST00000397491 PRR9Q5T870 116 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 ZNF462Q96JM2 2506 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 SHISA2Q6UWI4 295 aa11.18□□□□□ -0.62
CHL1-202ENST00000397491 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 A0A096LNJ9 63 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 POM121L12Q8N7R1 296 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 CDIP1Q9H305 208 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 CSDC2Q9Y534 153 aaKnown RBP11.17□□□□□ -0.62
CHL1-202ENST00000397491 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 SMIM11BQ8TCY0 68 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 MAP6D1Q9H9H5 199 aa11.17□□□□□ -0.62
CHL1-202ENST00000397491 LINC00269Q8N2A0 174 aa11.16□□□□□ -0.62
CHL1-202ENST00000397491 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
CHL1-202ENST00000397491 USP9YO00507 2555 aaPredicted RBP11.16□□□□□ -0.62
CHL1-202ENST00000397491 CCKP06307 115 aa11.16□□□□□ -0.62
CHL1-202ENST00000397491 SERP1Q9Y6X1 66 aa11.15□□□□□ -0.62
CHL1-202ENST00000397491 PRR4Q16378 134 aa11.15□□□□□ -0.62
CHL1-202ENST00000397491 HCFC1P51610 2035 aa11.15□□□□□ -0.62
CHL1-202ENST00000397491 IGIPA6NJ69 53 aa11.15□□□□□ -0.62
CHL1-202ENST00000397491 K7EQG2 157 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 DEFB4AO15263 64 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 MRPS36P82909 103 aaKnown RBP11.14□□□□□ -0.63
CHL1-202ENST00000397491 KIAA1549LQ6ZVL6 1849 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 FASNP49327 2511 aaKnown RBP11.14□□□□□ -0.63
CHL1-202ENST00000397491 ABCA12Q86UK0 2595 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 KIF26AQ9ULI4 1882 aaPredicted RBP11.14□□□□□ -0.63
CHL1-202ENST00000397491 Q6ZSV7 163 aa11.14□□□□□ -0.63
CHL1-202ENST00000397491 TMEM89A2RUT3 159 aa11.13□□□□□ -0.63
CHL1-202ENST00000397491 C3orf84H3BNL1 204 aa11.13□□□□□ -0.63
CHL1-202ENST00000397491 TMEM131Q92545 1883 aa11.13□□□□□ -0.63
CHL1-202ENST00000397491 TSPEAR-AS2P59090 65 aa11.13□□□□□ -0.63
CHL1-202ENST00000397491 IGF2-ASQ6U949 168 aa11.13□□□□□ -0.63
CHL1-202ENST00000397491 REG3AQ06141 175 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 Q6ZQY7 126 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 IGKV4-1P06312 121 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 MIFP14174 115 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 CHCHD10Q8WYQ3 142 aaPredicted RBP11.12□□□□□ -0.63
CHL1-202ENST00000397491 DCANP1Q8TF63 244 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 UBE2D4Q9Y2X8 147 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 IGLV4-69A0A075B6H9 119 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 A6NDX4 124 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 A6NED7 52 aa11.12□□□□□ -0.63
CHL1-202ENST00000397491 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
CHL1-202ENST00000397491 LY6LH3BQJ8 138 aa11.11□□□□□ -0.63
CHL1-202ENST00000397491 C1orf158Q8N1D5 194 aa11.11□□□□□ -0.63
CHL1-202ENST00000397491 C2orf16Q68DN1 1984 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 UBE2AP49459 152 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 TRAV7A0A075B6U4 112 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 C22orf34Q6ZV56 151 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 WFDC10BQ8IUB3 73 aa11.1□□□□□ -0.63
CHL1-202ENST00000397491 CRYGDP07320 174 aa11.09□□□□□ -0.63
CHL1-202ENST00000397491 NRGNQ92686 78 aa11.09□□□□□ -0.63
CHL1-202ENST00000397491 DEFB135Q30KP9 77 aa11.09□□□□□ -0.63
CHL1-202ENST00000397491 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.64
CHL1-202ENST00000397491 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
CHL1-202ENST00000397491 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
CHL1-202ENST00000397491 TRBV6-8A0A0A6YYG3 113 aa11.07□□□□□ -0.64
CHL1-202ENST00000397491 EBI3Q14213 229 aa11.06□□□□□ -0.64
CHL1-202ENST00000397491 LRRK2Q5S007 2527 aa11.06□□□□□ -0.64
CHL1-202ENST00000397491 ADORA2A-AS1P86434 159 aa11.06□□□□□ -0.64
CHL1-202ENST00000397491 KLLNB2CW77 178 aa11.06□□□□□ -0.64
CHL1-202ENST00000397491 NUP210LQ5VU65 1888 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms